logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: QRD01103.1

You are here: Home > Sequence: QRD01103.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parastagonospora nodorum
Lineage Ascomycota; Dothideomycetes; ; Phaeosphaeriaceae; Parastagonospora; Parastagonospora nodorum
CAZyme ID QRD01103.1
CAZy Family GH2
CAZyme Description F5/8 type C domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A7U2F9A4]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
663 CP069033|CGC2 69498.69 6.4987
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PnodorumSN15 17580 321614 132 17448
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.1.3.9:34 1.1.3.13:3 1.1.3.-:1 1.1.3.7:1 1.1.3.47:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA5 48 660 6e-243 0.9863945578231292

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
199882 E_set_GO_C 5.61e-30 564 661 1 103
C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others.
401164 DUF1929 9.40e-23 576 661 3 91
Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase.
395611 F5_F8_type_C 2.01e-19 34 163 1 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
238014 FA58C 4.81e-16 33 154 12 136
Substituted updates: Jan 31, 2002
276965 Kelch 1.35e-10 198 346 5 140
Kelch repeat. Kelch repeats are 44 to 56 amino acids in length and form a four-stranded beta-sheet corresponding to a single blade of five to seven bladed beta propellers. The Kelch superfamily is a large evolutionary conserved protein family whose members are present throughout the cell and extracellularly, and have diverse activities. Kelch repeats are often in combination with other domains, like BTB and BACK or F-box domains.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 663 1 663
0.0 23 660 23 652
0.0 11 662 4 632
4.35e-219 27 662 8 638
4.35e-219 27 662 8 638

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.13e-220 27 662 8 638
Glactose oxidase C383S mutant identified by directed evolution [Fusarium sp.]
8.57e-220 27 662 8 638
NOVEL THIOETHER BOND REVEALED BY A 1.7 ANGSTROMS CRYSTAL STRUCTURE OF GALACTOSE OXIDASE [Hypomyces rosellus],1GOG_A NOVEL THIOETHER BOND REVEALED BY A 1.7 ANGSTROMS CRYSTAL STRUCTURE OF GALACTOSE OXIDASE [Hypomyces rosellus],1GOH_A NOVEL THIOETHER BOND REVEALED BY A 1.7 ANGSTROMS CRYSTAL STRUCTURE OF GALACTOSE OXIDASE [Hypomyces rosellus],2EIE_A Chain A, Galactose oxidase [Fusarium graminearum],2JKX_A Chain A, GALACTOSE OXIDASE [Fusarium graminearum],2VZ1_A Chain A, GALACTOSE OXIDASE [Fusarium graminearum],2VZ3_A Chain A, Galactose Oxidase [Fusarium graminearum]
2.48e-218 15 662 13 655
Crystal Structure of the Precursor of Galactose Oxidase [Fusarium sp.]
2.79e-218 27 662 8 638
Chain A, Galactose oxidase [Fusarium graminearum]
7.93e-218 27 662 8 638
Chain A, Galactose oxidase [Fusarium graminearum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.55e-219 15 662 37 679
Galactose oxidase OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=GAOA PE=3 SV=1
8.86e-219 15 662 37 679
Galactose oxidase OS=Gibberella zeae OX=5518 GN=GAOA PE=1 SV=1
6.72e-10 36 165 632 765
O-GlcNAcase NagJ OS=Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A) OX=195103 GN=nagJ PE=1 SV=1
6.72e-10 36 165 632 765
O-GlcNAcase NagJ OS=Clostridium perfringens (strain 13 / Type A) OX=195102 GN=nagJ PE=1 SV=1
1.64e-09 35 165 512 643
Sialidase OS=Micromonospora viridifaciens OX=1881 GN=nedA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.284984 0.714995 CS pos: 27-28. Pr: 0.6052

TMHMM  Annotations      help

There is no transmembrane helices in QRD01103.1.