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CAZyme Information: QRD00072.1

You are here: Home > Sequence: QRD00072.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parastagonospora nodorum
Lineage Ascomycota; Dothideomycetes; ; Phaeosphaeriaceae; Parastagonospora; Parastagonospora nodorum
CAZyme ID QRD00072.1
CAZy Family GH17
CAZyme Description beta-xylanase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
393 41343.19 6.6161
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PnodorumSN15 17580 321614 132 17448
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8:45

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 97 389 6.7e-98 0.9867986798679867

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395262 Glyco_hydro_10 8.45e-121 97 388 1 308
Glycosyl hydrolase family 10.
214750 Glyco_10 1.96e-98 140 388 1 263
Glycosyl hydrolase family 10.
226217 XynA 5.09e-60 96 392 23 341
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
395595 CBM_1 8.98e-13 20 48 1 29
Fungal cellulose binding domain.
197593 fCBD 3.76e-12 20 51 2 33
Fungal-type cellulose-binding domain. Small four-cysteine cellulose-binding domain of fungi

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.26e-287 1 393 1 393
4.49e-180 8 392 15 425
4.27e-177 9 392 15 451
1.25e-171 9 392 15 451
1.25e-171 9 392 15 451

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.10e-132 96 392 4 302
Crystal Structure of xylanase (GH10) in complex with inhibitor (XIP) [Aspergillus nidulans]
9.63e-131 93 392 2 302
XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH 1,2-(4-DEOXY-BETA-L-THREO-HEX-4-ENOPYRANOSYLURONIC ACID)-BETA-1,4-XYLOTRIOSE) [Penicillium simplicissimum],1B31_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, NATIVE WITH PEG200 AS CRYOPROTECTANT [Penicillium simplicissimum],1B3V_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH XYLOSE [Penicillium simplicissimum],1B3W_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH XYLOBIOSE [Penicillium simplicissimum],1B3X_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH XYLOTRIOSE [Penicillium simplicissimum],1B3Y_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH XYLOTETRAOSE [Penicillium simplicissimum],1B3Z_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH XYLOPENTAOSE [Penicillium simplicissimum],1BG4_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM [Penicillium simplicissimum]
5.72e-130 96 388 5 297
0.89A Ultra high resolution structure of a Thermostable Xylanase from Thermoascus Aurantiacus [Thermoascus aurantiacus],1I1X_A 1.11 A ATOMIC RESOLUTION STRUCTURE OF A THERMOSTABLE XYLANASE FROM THERMOASCUS AURANTIACUS [Thermoascus aurantiacus]
4.65e-129 96 388 5 297
The xylanase TA from Thermoascus aurantiacus utilizes arabinose decorations of xylan as significant substrate specificity determinants. [Thermoascus aurantiacus]
7.59e-128 96 388 5 297
Thermostable xylanase I from Thermoascus aurantiacus- Crystal form II [Thermoascus aurantiacus],1GOM_A Thermostable xylanase I from Thermoascus aurantiacus- Crystal form I [Thermoascus aurantiacus],1GOO_A Thermostable xylanase I from Thermoascus aurantiacus - Cryocooled glycerol complex [Thermoascus aurantiacus],1GOQ_A Thermostable xylanase I from Thermoascus aurantiacus - Room temperature xylobiose complex [Thermoascus aurantiacus],1GOR_A THERMOSTABLE XYLANASE I FROM THERMOASCUS AURANTIACUS - XYLOBIOSE COMPLEX AT 100 K [Thermoascus aurantiacus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.38e-136 93 392 24 323
Endo-1,4-beta-xylanase F3 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=xynF3 PE=1 SV=1
7.41e-135 1 392 1 385
Putative endoglucanase type F OS=Fusarium oxysporum OX=5507 PE=2 SV=1
1.78e-134 4 392 5 380
Endo-1,4-beta-xylanase 6 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=XYL6 PE=3 SV=1
1.78e-134 4 392 5 380
Endo-1,4-beta-xylanase 6 OS=Magnaporthe grisea OX=148305 GN=XYL6 PE=1 SV=1
2.61e-133 89 392 23 326
Probable endo-1,4-beta-xylanase C OS=Aspergillus terreus OX=33178 GN=xlnC PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000235 0.999747 CS pos: 16-17. Pr: 0.9795

TMHMM  Annotations      help

There is no transmembrane helices in QRD00072.1.