CAZyme Information: QRC96362.1

Basic Information

• Species: Parastagonospora nodorum
• Lineage: Ascomycota; Dothideomycetes; ; Phaeosphaeriaceae; Parastagonospora; Parastagonospora nodorum
• CAZyme ID: QRC96362.1
• CAZy Family: CE4
• CAZyme Description: Glycoside hydrolase family 55 protein [Source:UniProtKB/TrEMBL;Acc:A0A7U2F0G4]

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
882	CP069028|CGC9	95548.71	5.0297

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PnodorumSN15	17580	321614	132	17448

• Gene Location: location=CP069028:1085604-1088300(-)

Full Sequence      

MLKSSIILGLSACAFALNVPRVKRYSESYSSVGYESTSTAVVTPVSSQVSTSTLIETPSS
SITTRSPAFDHSISVIAYSTSDGDRTSPKPSPTGTPDCAAPYWLENIKHQGLASFNDGTP
NNGTSFSNGTLFNNRTSFSNVTSYRVFRNVKDYGAKGDGITDDTAAINRAMTDGNRCAPS
YCESSTITPAIVYFPGGTYVISRSIIDYYYTQMIGNPNCLPVIQASANFTSSDLGLIDGS
PYLNEGPRAGGTGYGATTTFFRQIRNLILDMTLMPANVIATGIHWPTAQTTSLQNIVINM
SAANGTLHQGILVEAGSAGFMTDLVFNGGKYGLDVGNQQYTNRNLTFNNVETAINQLWDW
GWTYTGLTINNCRVGLNLSGDVGSITLFDSEIINTPVGIQTVKANSELPAAGSIYLENVK
LENVRTAVLGPNATYLAGSSDATVIDAWAYGHRYLPNGPRKSRGHIAPSERPADLLDASG
NYYVRSKPQYDSEPLTSFLSARDMGCTGDGKTDDTKALNGAILKARGEGKILFMDAGYYL
VTDTIYIPPDSKIVGEALATVILSSGSSFNDMQFPRAVVQVAQPGEEGSLELSDLIVSTQ
GPQQGAILIQYNLRTIASEPSGLWDVHTRIGGFKGSNLQGAQCEKTPNITITASTLQKEC
IAAYMSMHVTKFASGLYMENNWLWTSDHDLDYPYAQLTLYAGRGLLIESLQGRIWLYGTA
VEHHVKYEYQFVDTRNIFMGQVQTETAYYQPNPDASLPFPEDKSLSDPVFTPSRNSSVST
ADGWGMRILRSNNILGYGVGLYSFFNNYNTTCNARAAGSPCQTRILSIEGQQNSYSINIY
NLNTVGAGQMITRDGVDLARNLDNNSTFVDTINVFRINEFGA

Enzyme Prediction     

EC	3.2.1.58:16

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH55	97	875	6.3e-257	0.9851351351351352

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
403800	Pectate_lyase_3	1.22e-89	147	377	1	213	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
227721	Pgu1	1.71e-05	149	450	84	426	Polygalacturonase [Carbohydrate transport and metabolism].
403800	Pectate_lyase_3	2.38e-04	498	569	1	74	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QRC96362.1|GH55	0.0	1	882	1	882
CAE7196349.1|GH55	0.0	92	881	57	837
CBX90532.1|GH55	0.0	84	881	54	843
QIW95190.1|GH55	2.63e-307	86	876	46	805
UJO17689.1|GH55	1.73e-303	88	876	67	848

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5M5Z_A	6.20e-202	102	876	6	754	Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila],5M60_A Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila]
3EQN_A	3.95e-188	101	878	25	758	Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQN_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_A Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|P49426|EXG1_COCCA	4.95e-226	102	872	48	781	Glucan 1,3-beta-glucosidase OS=Cochliobolus carbonum OX=5017 GN=EXG1 PE=1 SV=1
sp|D4B0V1|E13B_ARTBC	2.38e-191	99	875	40	873	Probable glucan endo-1,3-beta-glucosidase ARB_02077 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_02077 PE=1 SV=1
sp|P53626|E13B_TRIHA	4.75e-43	163	873	71	744	Glucan endo-1,3-beta-glucosidase BGN13.1 OS=Trichoderma harzianum OX=5544 GN=bgn13.1 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.001876	0.998062	CS pos: 24-25. Pr: 0.5087

TMHMM  Annotations     

There is no transmembrane helices in QRC96362.1.