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CAZyme Information: QRC93226.1

You are here: Home > Sequence: QRC93226.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parastagonospora nodorum
Lineage Ascomycota; Dothideomycetes; ; Phaeosphaeriaceae; Parastagonospora; Parastagonospora nodorum
CAZyme ID QRC93226.1
CAZy Family AA8|AA3
CAZyme Description GMC_OxRdtase_N domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A7U2HYD2]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
669 72794.39 6.2372
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PnodorumSN15 17580 321614 132 17448
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in QRC93226.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 33 665 2.7e-88 0.9964788732394366

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225186 BetA 3.66e-56 28 666 2 537
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000 PRK02106 2.49e-53 31 663 3 532
choline dehydrogenase; Validated
398739 GMC_oxred_C 5.53e-24 509 658 1 143
GMC oxidoreductase. This domain found associated with pfam00732.
366272 GMC_oxred_N 6.11e-20 136 405 19 218
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
215420 PLN02785 8.48e-15 19 403 41 327
Protein HOTHEAD

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 669 1 669
0.0 1 667 1 674
9.34e-210 30 667 35 669
4.28e-208 30 667 35 669
6.07e-208 30 667 35 669

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.39e-30 24 667 32 602
Crystal structure of pyranose dehydrogenase from Agaricus meleagris, wildtype [Leucoagaricus meleagris]
2.43e-28 34 667 84 641
Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
6.93e-28 34 667 8 565
Chain A, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
6.93e-28 34 667 8 565
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
6.93e-28 34 667 8 565
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.89e-40 34 663 5 531
Oxygen-dependent choline dehydrogenase OS=Vibrio vulnificus (strain YJ016) OX=196600 GN=betA PE=3 SV=1
1.19e-39 34 663 5 531
Oxygen-dependent choline dehydrogenase OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=betA PE=3 SV=1
2.03e-38 34 662 5 533
Oxygen-dependent choline dehydrogenase OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) OX=220664 GN=betA PE=3 SV=1
3.65e-38 34 662 5 533
Oxygen-dependent choline dehydrogenase OS=Pseudomonas putida (strain ATCC 700007 / DSM 6899 / BCRC 17059 / F1) OX=351746 GN=betA PE=3 SV=1
4.95e-38 34 662 5 533
Oxygen-dependent choline dehydrogenase OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=betA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.675718 0.324287

TMHMM  Annotations      help

There is no transmembrane helices in QRC93226.1.