logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: QRC90597.1

You are here: Home > Sequence: QRC90597.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parastagonospora nodorum
Lineage Ascomycota; Dothideomycetes; ; Phaeosphaeriaceae; Parastagonospora; Parastagonospora nodorum
CAZyme ID QRC90597.1
CAZy Family AA2
CAZyme Description Glyco_hydro_cc domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A7U2HWF0]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
300 33340.58 6.8221
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PnodorumSN15 17580 321614 132 17448
Gene Location Start: 1318195; End:1319261  Strand: +

Full Sequence      Download help

MQFLLLTLCL  ALLAAARTIT  GEIRTAAAAP  KEDPPSRRRG  VAYNNPPFAN  YFDVMNSGGQ60
VSWSYNWASR  PTEQHTSFEF  IPMLWSNQDS  STSKWWDSIK  DAGGIFKDNP  THLLAFNEPD120
NCRMGSGGAC  MSVSDSVAAW  RQHMEPAKTL  KEKMYLGSPA  VTNGGTGMGL  DWLGQFVKEC180
AGCNIDFICI  HWYDKANNVQ  YFKDHINRAR  DVAGGRPIWI  TELGPQGTDA  EIKSFLDQVI240
PWMEDSGDIH  RYAYFMAREG  LLVNNQGTGL  SDIGSHFTYW  RRANGGFTTK  SNSTIVAAKL300
300

Enzyme Prediction      help

No EC number prediction in QRC90597.1.

CAZyme Signature Domains help

Created with Snap1530456075901051201351501651801952102252402552702854222GH128
Family Start End Evalue family coverage
GH128 55 275 1.4e-60 0.9732142857142857

CDD Domains      download full data without filtering help

Created with Snap15304560759010512013515016518019521022524025527028542277Glyco_hydro_cc
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
371727 Glyco_hydro_cc 3.18e-78 42 277 1 235
Glycosyl hydrolase catalytic core. This family is probably a glycosyl hydrolase, and is conserved in fungi and some Proteobacteria. The pombe member is annotated as being from IPR013781.

CAZyme Hits      help

Created with Snap1530456075901051201351501651801952102252402552702851300QRC90597.1|GH12818277CBX99407.1|GH12825279CAE7208436.1|GH12838277QDS69752.1|GH12836277VDB93860.1|GH128
Hit ID E-Value Query Start Query End Hit Start Hit End
QRC90597.1|GH128 8.40e-230 1 300 1 300
CBX99407.1|GH128 1.87e-86 18 277 31 291
CAE7208436.1|GH128 8.85e-80 25 279 41 301
QDS69752.1|GH128 3.86e-60 38 277 155 387
VDB93860.1|GH128 1.38e-54 36 277 197 422

PDB Hits      download full data without filtering help

Created with Snap153045607590105120135150165180195210225240255270285332776UAY_A362776UB0_A342586UAX_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6UAY_A 8.33e-42 33 277 30 258
Crystal structure of a GH128 (subgroup III) curdlan-specific exo-beta-1,3-glucanase from Blastomyces gilchristii (BgGH128_III) [Blastomyces gilchristii],6UAY_B Crystal structure of a GH128 (subgroup III) curdlan-specific exo-beta-1,3-glucanase from Blastomyces gilchristii (BgGH128_III) [Blastomyces gilchristii],6UAZ_A Crystal structure of a GH128 (subgroup III) curdlan-specific exo-beta-1,3-glucanase from Blastomyces gilchristii (BgGH128_III) in complex with glucose [Blastomyces gilchristii],6UAZ_B Crystal structure of a GH128 (subgroup III) curdlan-specific exo-beta-1,3-glucanase from Blastomyces gilchristii (BgGH128_III) in complex with glucose [Blastomyces gilchristii],6UB1_A Crystal structure of a GH128 (subgroup III) curdlan-specific exo-beta-1,3-glucanase from Blastomyces gilchristii (BgGH128_III) in complex with laminaribiose at -3 and -2 subsites [Blastomyces gilchristii],6UB1_B Crystal structure of a GH128 (subgroup III) curdlan-specific exo-beta-1,3-glucanase from Blastomyces gilchristii (BgGH128_III) in complex with laminaribiose at -3 and -2 subsites [Blastomyces gilchristii],6UB1_C Crystal structure of a GH128 (subgroup III) curdlan-specific exo-beta-1,3-glucanase from Blastomyces gilchristii (BgGH128_III) in complex with laminaribiose at -3 and -2 subsites [Blastomyces gilchristii],6UB1_D Crystal structure of a GH128 (subgroup III) curdlan-specific exo-beta-1,3-glucanase from Blastomyces gilchristii (BgGH128_III) in complex with laminaribiose at -3 and -2 subsites [Blastomyces gilchristii]
6UB0_A 1.42e-41 36 277 2 227
Crystal structure of a GH128 (subgroup III) curdlan-specific exo-beta-1,3-glucanase from Blastomyces gilchristii (BgGH128_III) in complex with laminaribiose at -2 and -1 subsites [Blastomyces gilchristii SLH14081]
6UAX_A 1.36e-17 34 258 91 319
Crystal structure of a GH128 (subgroup II) endo-beta-1,3-glucanase from Sorangium cellulosum (ScGH128_II) [Sorangium cellulosum So ce56],6UAX_B Crystal structure of a GH128 (subgroup II) endo-beta-1,3-glucanase from Sorangium cellulosum (ScGH128_II) [Sorangium cellulosum So ce56]

Swiss-Prot Hits      help

QRC90597.1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000320 0.999653 CS pos: 16-17. Pr: 0.9390

TMHMM  Annotations      help

There is no transmembrane helices in QRC90597.1.