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CAZyme Information: QRC90522.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Parastagonospora nodorum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Dothideomycetes; ; Phaeosphaeriaceae; Parastagonospora; Parastagonospora nodorum | |||||||||||
| CAZyme ID | QRC90522.1 | |||||||||||
| CAZy Family | AA2 | |||||||||||
| CAZyme Description | Exopolygalacturonase [Source:UniProtKB/TrEMBL;Acc:A0A7U2HWB2] | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.67:7 | 3.2.1.-:2 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 80 | 431 | 7.1e-76 | 0.9230769230769231 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 7.09e-42 | 147 | 415 | 54 | 303 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215426 | PLN02793 | 3.13e-29 | 108 | 420 | 111 | 399 | Probable polygalacturonase |
| 215120 | PLN02188 | 5.46e-29 | 229 | 426 | 204 | 387 | polygalacturonase/glycoside hydrolase family protein |
| 215540 | PLN03010 | 2.50e-26 | 108 | 431 | 107 | 391 | polygalacturonase |
| 178580 | PLN03003 | 8.58e-23 | 150 | 417 | 117 | 359 | Probable polygalacturonase At3g15720 |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 6.60e-309 | 1 | 453 | 1 | 453 | |
| 2.12e-225 | 1 | 448 | 1 | 448 | |
| 7.51e-223 | 1 | 438 | 1 | 438 | |
| 5.80e-213 | 1 | 448 | 1 | 446 | |
| 5.93e-186 | 32 | 439 | 25 | 432 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.05e-59 | 58 | 439 | 19 | 383 | Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis] |
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| 3.50e-16 | 98 | 438 | 24 | 344 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 3.50e-16 | 98 | 438 | 24 | 344 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 4.35e-16 | 98 | 438 | 16 | 327 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 8.29e-15 | 55 | 431 | 18 | 355 | Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.03e-213 | 1 | 448 | 1 | 446 | Exopolygalacturonase OS=Cochliobolus carbonum OX=5017 GN=PGX1 PE=3 SV=1 |
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| 1.05e-186 | 32 | 439 | 25 | 432 | Exopolygalacturonase X-1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgaX-1 PE=1 SV=1 |
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| 8.00e-186 | 36 | 438 | 29 | 431 | Probable exopolygalacturonase X OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pgaX PE=3 SV=2 |
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| 8.00e-186 | 36 | 438 | 29 | 431 | Probable exopolygalacturonase X OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pgaX PE=3 SV=2 |
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| 2.00e-184 | 36 | 439 | 29 | 432 | Probable exopolygalacturonase X OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pgaX PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.035012 | 0.964950 | CS pos: 25-26. Pr: 0.4331 |