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CAZyme Information: QHS74377.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Saccharomyces paradoxus | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Saccharomycetes; ; Saccharomycetaceae; Saccharomyces; Saccharomyces paradoxus | |||||||||||
| CAZyme ID | QHS74377.1 | |||||||||||
| CAZy Family | GT15 | |||||||||||
| CAZyme Description | Pgu1 | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:8 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 40 | 346 | 2e-66 | 0.9323076923076923 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 1.97e-116 | 43 | 336 | 1 | 298 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 227721 | Pgu1 | 5.91e-53 | 84 | 281 | 188 | 400 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| 177865 | PLN02218 | 4.39e-25 | 41 | 316 | 93 | 381 | polygalacturonase ADPG |
| 178580 | PLN03003 | 8.09e-23 | 102 | 271 | 120 | 283 | Probable polygalacturonase At3g15720 |
| 215426 | PLN02793 | 9.78e-19 | 102 | 290 | 150 | 340 | Probable polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.97e-252 | 1 | 361 | 1 | 361 | |
| 4.63e-251 | 1 | 361 | 1 | 361 | |
| 3.64e-248 | 1 | 361 | 1 | 361 | |
| 1.48e-247 | 1 | 361 | 1 | 361 | |
| 2.11e-247 | 1 | 361 | 1 | 361 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.53e-119 | 26 | 361 | 2 | 339 | Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini] |
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| 6.01e-119 | 19 | 356 | 3 | 341 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 6.01e-119 | 19 | 356 | 3 | 341 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 9.87e-116 | 26 | 356 | 2 | 333 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 1.71e-107 | 15 | 355 | 18 | 358 | Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger],1CZF_B Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.07e-247 | 1 | 361 | 1 | 361 | Polygalacturonase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PGU1 PE=1 SV=1 |
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| 7.45e-119 | 21 | 356 | 24 | 361 | Polygalacturonase OS=Cochliobolus carbonum OX=5017 GN=PGN1 PE=3 SV=1 |
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| 8.27e-118 | 9 | 361 | 8 | 363 | Endopolygalacturonase 1 OS=Colletotrichum lindemuthianum OX=290576 GN=PG1 PE=3 SV=1 |
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| 1.46e-116 | 21 | 356 | 33 | 373 | Polygalacturonase OS=Penicillium griseoroseum OX=84562 GN=PGG1 PE=3 SV=1 |
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| 8.42e-113 | 12 | 356 | 17 | 361 | Endopolygalacturonase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgaB PE=1 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000261 | 0.999725 | CS pos: 24-25. Pr: 0.9697 |