dbCAN-seq: a database of CAZyme sequence and annotation

You are browsing environment: FUNGIDB

help

CAZyme Information: PYU1_T013084-p1

You are here: Home > Sequence: PYU1_T013084-p1

Basic Information help

Species

Globisporangium ultimum

Lineage

Oomycota; NA; ; Pythiaceae; Globisporangium; Globisporangium ultimum

CAZyme ID

PYU1_T013084-p1

CAZy Family

GT71

CAZyme Description

unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
2256		251401.40	7.6669

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_GultimumDAOMBR144	15430	431595	140	15290

Gene Location

Full Sequence Download help

Enzyme Prediction help

EC	2.4.1.34:28

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GT48	836	1560	2.3e-258	0.9228687415426252

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
396784	Glucan_synthase	1.31e-173	841	1521	7	700	1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1).
405046	FKS1_dom1	6.78e-36	132	229	4	106	1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364.
395036	Sugar_tr	1.58e-17	1815	2167	68	436	Sugar (and other) transporter.
273317	SP	1.99e-15	1821	2167	99	469	MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083) [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]
340917	MFS_XylE_like	6.12e-15	1815	2159	58	372	D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily. This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.

CAZyme Hits help

E-Value	Query Start	Query End	Hit Start
10	2253	21	2304
51	2239	43	2316
6	2216	14	2252
11	2183	12	2225
53	2241	69	2223

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
8.07e-10	1912	2128	151	376	The inward-facing structure of the glucose transporter from Staphylococcus epidermidis [Staphylococcus epidermidis ATCC 12228],4LDS_B The inward-facing structure of the glucose transporter from Staphylococcus epidermidis [Staphylococcus epidermidis ATCC 12228]
1.16e-08	1808	2177	97	499	Crystal structure of a double Trp XylE mutants (G58W/L315W) [Escherichia coli]
5.61e-08	1747	2177	14	471	Crystal structure of D-xylose-proton symporter [Escherichia coli K-12]
5.68e-08	1747	2177	15	472	Partially occluded inward open conformation of the xylose transporter XylE from E. coli [Escherichia coli K-12],4JA3_B Partially occluded inward open conformation of the xylose transporter XylE from E. coli [Escherichia coli K-12],4JA4_A Inward open conformation of the xylose transporter XylE from E. coli [Escherichia coli K-12],4JA4_B Inward open conformation of the xylose transporter XylE from E. coli [Escherichia coli K-12],4JA4_C Inward open conformation of the xylose transporter XylE from E. coli [Escherichia coli K-12]
5.75e-08	1747	2177	15	472	The structure of the MFS (major facilitator superfamily) proton:xylose symporter XylE bound to D-xylose [Escherichia coli K-12],4GBZ_A The structure of the MFS (major facilitator superfamily) proton:xylose symporter XylE bound to D-glucose [Escherichia coli K-12],4GC0_A The structure of the MFS (major facilitator superfamily) proton:xylose symporter XylE bound to 6-bromo-6-deoxy-D-glucose [Escherichia coli K-12]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
2.00e-227	51	1734	240	1910	Callose synthase 5 OS=Arabidopsis thaliana OX=3702 GN=CALS5 PE=1 SV=1
1.85e-219	51	1734	233	1931	Callose synthase 1 OS=Arabidopsis thaliana OX=3702 GN=CALS1 PE=1 SV=2
2.56e-217	51	1734	237	1936	Callose synthase 3 OS=Arabidopsis thaliana OX=3702 GN=CALS3 PE=3 SV=3
3.37e-217	46	1734	258	1889	Callose synthase 10 OS=Arabidopsis thaliana OX=3702 GN=CALS10 PE=2 SV=5
6.09e-217	51	1734	233	1931	Callose synthase 2 OS=Arabidopsis thaliana OX=3702 GN=CALS2 PE=2 SV=3

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000025	0.000000

TMHMM Annotations download full data without filtering help

Start	End
260	282
310	332
347	369
382	404
432	454
489	511
1274	1296
1329	1351
1361	1383
1421	1443
1479	1501
1591	1613
1623	1645
1657	1679
1694	1716
1744	1766
1801	1820
1825	1842
1847	1869
1882	1901
1921	1943
1991	2013
2033	2052
2064	2081
2091	2113
2125	2147
2152	2174