You are browsing environment: FUNGIDB
CAZyme Information: PYU1_T005884-p1
You are here: Home > Sequence: PYU1_T005884-p1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Globisporangium ultimum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Pythiaceae; Globisporangium; Globisporangium ultimum | |||||||||||
| CAZyme ID | PYU1_T005884-p1 | |||||||||||
| CAZy Family | GH5 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA17 | 14 | 265 | 2.5e-67 | 0.8979591836734694 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 227466 | COG5137 | 6.69e-05 | 174 | 278 | 141 | 246 | Histone chaperone involved in gene silencing [Transcription / Chromatin structure and dynamics]. |
| 380146 | MSCRAMM_SdrC | 2.08e-04 | 193 | 295 | 709 | 812 | MSCRAMM family adhesin SdrC. Features of this protein family include a YSIRK-type signal peptide at the N-terminus and a variable-length C-terminal region of Ser-Asp (SD) repeats followed by an LPXTG motif for surface immobilization by sortase. |
| 380149 | MSCRAMM_SdrD | 3.57e-04 | 193 | 297 | 1115 | 1219 | MSCRAMM family adhesin SdrD. Features of this protein family include a YSIRK-type signal peptide at the N-terminus and a variable-length C-terminal region of Ser-Asp (SD) repeats followed by an LPXTG motif for surface immobilization by sortase. |
| 227880 | COG5593 | 0.001 | 211 | 287 | 699 | 793 | Nucleic-acid-binding protein possibly involved in ribosomal biogenesis [Translation, ribosomal structure and biogenesis]. |
| 411414 | MSCRAMM_ClfB | 0.001 | 199 | 297 | 569 | 667 | MSCRAMM family adhesin clumping factor ClfB. Clumping factor B is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 2.11e-74 | 20 | 198 | 18 | 197 | |
| 2.18e-74 | 20 | 198 | 18 | 197 | |
| 2.18e-74 | 20 | 198 | 18 | 197 | |
| 4.37e-74 | 20 | 193 | 18 | 192 | |
| 4.37e-74 | 20 | 198 | 18 | 197 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.38e-17 | 24 | 191 | 1 | 170 | Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4] |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000289 | 0.999713 | CS pos: 23-24. Pr: 0.9758 |