You are browsing environment: FUNGIDB
CAZyme Information: PYU1_T002800-p1
You are here: Home > Sequence: PYU1_T002800-p1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Globisporangium ultimum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Pythiaceae; Globisporangium; Globisporangium ultimum | |||||||||||
| CAZyme ID | PYU1_T002800-p1 | |||||||||||
| CAZy Family | GH16 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 1.1.99.18:3 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 2 | 524 | 2.7e-107 | 0.9616788321167883 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 225186 | BetA | 1.08e-38 | 2 | 526 | 8 | 535 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| 235000 | PRK02106 | 4.13e-23 | 1 | 325 | 5 | 311 | choline dehydrogenase; Validated |
| 366272 | GMC_oxred_N | 2.88e-13 | 89 | 303 | 24 | 215 | GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
| 238533 | APPLE_Factor_XI_like | 1.61e-10 | 790 | 850 | 11 | 70 | Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. |
| 238533 | APPLE_Factor_XI_like | 3.78e-09 | 707 | 777 | 5 | 72 | Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 3.97e-237 | 2 | 593 | 29 | 623 | |
| 8.50e-237 | 2 | 852 | 24 | 879 | |
| 2.24e-222 | 2 | 852 | 24 | 883 | |
| 4.79e-153 | 2 | 506 | 22 | 526 | |
| 1.15e-152 | 2 | 535 | 24 | 560 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.39e-54 | 2 | 524 | 3 | 534 | Chain A, Cellobiose dehydrogenase [Phanerodontia chrysosporium],1NAA_B Chain B, Cellobiose dehydrogenase [Phanerodontia chrysosporium] |
|
| 1.53e-54 | 2 | 524 | 8 | 539 | Chain A, cellobiose dehydrogenase [Phanerodontia chrysosporium],1KDG_B Chain B, cellobiose dehydrogenase [Phanerodontia chrysosporium] |
|
| 5.89e-43 | 2 | 534 | 8 | 552 | Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides],4QI5_A Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides] |
|
| 4.55e-42 | 2 | 534 | 230 | 774 | Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides] |
|
| 4.47e-40 | 2 | 534 | 230 | 773 | Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A],4QI7_B Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.34e-52 | 2 | 524 | 235 | 766 | Cellobiose dehydrogenase OS=Phanerodontia chrysosporium OX=2822231 GN=CDH-1 PE=1 SV=1 |
|
| 1.29e-18 | 2 | 531 | 7 | 536 | 4-pyridoxate dehydrogenase OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=padh1 PE=1 SV=1 |
|
| 3.73e-16 | 2 | 354 | 3 | 342 | Oxygen-dependent choline dehydrogenase OS=Escherichia coli (strain K12 / DH10B) OX=316385 GN=betA PE=3 SV=1 |
|
| 3.73e-16 | 2 | 354 | 3 | 342 | Oxygen-dependent choline dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks) OX=481805 GN=betA PE=3 SV=1 |
|
| 3.73e-16 | 2 | 354 | 3 | 342 | Oxygen-dependent choline dehydrogenase OS=Escherichia coli (strain K12) OX=83333 GN=betA PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000028 | 0.000006 |