logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: PWY68253.1

You are here: Home > Sequence: PWY68253.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus eucalypticola
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus eucalypticola
CAZyme ID PWY68253.1
CAZy Family GH11
CAZyme Description pectin methylesterase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
400 MSFU01000020|CGC2 43462.16 4.9783
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AeucalypticolaCBS122712 12207 1448314 274 11933
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PWY68253.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 57 372 1.3e-57 0.9444444444444444

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
178372 PLN02773 1.14e-26 60 355 16 275
pectinesterase
215535 PLN02990 2.43e-24 55 355 265 531
Probable pectinesterase/pectinesterase inhibitor
215367 PLN02682 2.43e-23 43 355 67 340
pectinesterase family protein
178051 PLN02432 3.35e-22 60 355 22 265
putative pectinesterase
395871 Pectinesterase 2.58e-21 60 355 11 271
Pectinesterase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.27e-288 1 399 1 399
1.27e-288 1 399 1 399
1.65e-279 1 399 1 397
1.45e-166 5 396 5 385
1.45e-166 5 396 5 385

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.08e-21 43 367 7 284
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
4.22e-21 43 367 7 284
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
1.70e-08 207 355 125 274
Chain A, Pectinesterase 1 [Solanum lycopersicum]
4.53e-08 56 353 13 314
Chain A, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]
2.50e-06 56 353 13 314
Crystal structure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTB_B Crystal structure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTP_A Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTP_B Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTQ_A Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937],2NTQ_B Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.70e-21 10 367 7 312
Probable pectinesterase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pmeA PE=3 SV=1
8.64e-19 60 355 100 358
Probable pectinesterase 15 OS=Arabidopsis thaliana OX=3702 GN=PME15 PE=2 SV=1
9.23e-19 60 355 255 518
Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana OX=3702 GN=PME20 PE=2 SV=2
1.70e-18 46 355 252 531
Probable pectinesterase/pectinesterase inhibitor 41 OS=Arabidopsis thaliana OX=3702 GN=PME41 PE=2 SV=2
1.01e-17 61 349 17 269
Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000232 0.999770 CS pos: 18-19. Pr: 0.9612

TMHMM  Annotations      help

There is no transmembrane helices in PWY68253.1.