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CAZyme Information: PWY65559.1

You are here: Home > Sequence: PWY65559.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus eucalypticola
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus eucalypticola
CAZyme ID PWY65559.1
CAZy Family CBM21
CAZyme Description exopolygalacturonase B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
429 MSFU01000027|CGC1 45560.47 4.2369
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AeucalypticolaCBS122712 12207 1448314 274 11933
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PWY65559.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 77 409 3.3e-57 0.8830769230769231

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 3.07e-22 82 390 24 303
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
177865 PLN02218 3.68e-22 40 391 77 409
polygalacturonase ADPG
215120 PLN02188 4.83e-21 3 391 6 375
polygalacturonase/glycoside hydrolase family protein
215426 PLN02793 7.30e-17 130 390 149 394
Probable polygalacturonase
215540 PLN03010 1.61e-16 40 426 56 408
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.94e-288 1 429 35 463
1.94e-288 1 429 35 463
1.91e-259 76 429 1 354
1.91e-259 76 429 1 354
5.74e-172 30 429 19 421

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.71e-32 29 416 14 383
Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis]
5.30e-08 82 397 41 338
Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.57e-290 1 429 1 429
Alpha-L-rhamnosidase rgxB OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rgxB PE=2 SV=2
8.20e-71 12 408 13 430
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger OX=5061 GN=rgxA PE=2 SV=1
1.62e-70 11 408 12 430
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rgxA PE=2 SV=2
8.51e-66 34 415 31 435
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rgxA PE=3 SV=2
8.51e-66 34 415 31 435
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rgxA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000194 0.999795 CS pos: 20-21. Pr: 0.9882

TMHMM  Annotations      help

There is no transmembrane helices in PWY65559.1.