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CAZyme Information: PV10_00989-t45_1-p1

You are here: Home > Sequence: PV10_00989-t45_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Exophiala mesophila
Lineage Ascomycota; Eurotiomycetes; ; Herpotrichiellaceae; Exophiala; Exophiala mesophila
CAZyme ID PV10_00989-t45_1-p1
CAZy Family AA2
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
568 62766.02 5.7359
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_EmesophilaCBS40295 9237 N/A 56 9181
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PV10_00989-t45_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 8 561 6e-142 0.9947183098591549

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225186 BetA 2.43e-71 28 556 22 530
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000 PRK02106 7.47e-59 8 542 4 513
choline dehydrogenase; Validated
398739 GMC_oxred_C 2.88e-35 421 553 2 140
GMC oxidoreductase. This domain found associated with pfam00732.
215420 PLN02785 1.35e-27 28 548 70 564
Protein HOTHEAD
366272 GMC_oxred_N 1.58e-21 77 307 13 217
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.82e-166 4 567 2 569
2.41e-164 9 566 5 564
4.29e-164 8 567 6 566
9.67e-164 9 566 5 564
2.44e-163 8 567 6 566

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.40e-47 10 560 2 561
Crystal structure of aryl-alcohol oxidase from Pleurotus eryngii in complex with p-anisic acid [Pleurotus eryngii]
1.42e-47 10 560 3 562
Crystal structure of aryl-alcohol-oxidase from Pleurotus eryingii [Pleurotus eryngii]
1.48e-42 10 564 41 601
Crystal structure of pyranose dehydrogenase from Agaricus meleagris, wildtype [Leucoagaricus meleagris]
2.81e-40 3 562 7 528
Chain A, Choline oxidase [Arthrobacter globiformis],3LJP_B Chain B, Choline oxidase [Arthrobacter globiformis]
2.81e-40 3 562 7 528
Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],2JBV_B Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],4MJW_A Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis],4MJW_B Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.73e-56 9 560 40 607
Dehydrogenase pkfF OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pkfF PE=2 SV=1
5.73e-52 10 566 3 537
Oxygen-dependent choline dehydrogenase OS=Escherichia coli (strain 55989 / EAEC) OX=585055 GN=betA PE=3 SV=1
5.73e-52 10 567 3 538
Oxygen-dependent choline dehydrogenase OS=Shigella flexneri serotype 5b (strain 8401) OX=373384 GN=betA PE=3 SV=1
5.73e-52 10 566 3 537
Oxygen-dependent choline dehydrogenase OS=Escherichia coli (strain SE11) OX=409438 GN=betA PE=3 SV=1
5.73e-52 10 566 3 537
Oxygen-dependent choline dehydrogenase OS=Escherichia coli (strain K12 / DH10B) OX=316385 GN=betA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999639 0.000402

TMHMM  Annotations      help

There is no transmembrane helices in PV10_00989-t45_1-p1.