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CAZyme Information: PV07_12478-t44_1-p1

You are here: Home > Sequence: PV07_12478-t44_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Cladophialophora immunda
Lineage Ascomycota; Eurotiomycetes; ; Herpotrichiellaceae; Cladophialophora; Cladophialophora immunda
CAZyme ID PV07_12478-t44_1-p1
CAZy Family GT76
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
420 43572.58 4.3250
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_CimmundaCBS83496 12879 N/A 49 12830
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PV07_12478-t44_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA14 19 287 8.3e-82 0.9882352941176471

CDD Domains      help

PV07_12478-t44_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
8.38e-129 10 287 9 286
4.49e-126 10 287 9 286
6.94e-124 10 286 9 285
1.57e-121 10 286 9 285
3.50e-118 10 286 9 286

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.49e-47 19 286 1 261
Crystal Structure of a Xylan-active Lytic Polysaccharide Monooxygenase from Pycnoporus coccineus. [Trametes cinnabarina],5NO7_B Crystal Structure of a Xylan-active Lytic Polysaccharide Monooxygenase from Pycnoporus coccineus. [Trametes cinnabarina]

Swiss-Prot Hits      help

PV07_12478-t44_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000234 0.999738 CS pos: 18-19. Pr: 0.9648

TMHMM  Annotations      help

There is no transmembrane helices in PV07_12478-t44_1-p1.