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CAZyme Information: PV07_09613-t44_1-p1

You are here: Home > Sequence: PV07_09613-t44_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Cladophialophora immunda
Lineage Ascomycota; Eurotiomycetes; ; Herpotrichiellaceae; Cladophialophora; Cladophialophora immunda
CAZyme ID PV07_09613-t44_1-p1
CAZy Family GT90
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
956 106692.00 6.3627
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_CimmundaCBS83496 12879 N/A 49 12830
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PV07_09613-t44_1-p1.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
283371 Raffinose_syn 1.03e-54 387 858 194 701
Raffinose synthase or seed imbibition protein Sip1. This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins. Raffinose (O-alpha- D-galactopyranosyl- (1-->6)- O-alpha- D-glucopyranosyl-(1<-->2)- O-beta- D-fructofuranoside) is a widespread oligosaccharide in plant seeds and other tissues. Raffinose synthase (EC:2.4.1.82) is the key enzyme that channels sucrose into the raffinose oligosaccharide pathway. Raffinose family oligosaccharides (RFOs) are ubiquitous in plant seeds and are thought to play critical roles in the acquisition of tolerance to desiccation and seed longevity. Raffinose synthases are alkaline alpha-galactosidases and are solely responsible for RFO breakdown in germinating maize seeds, whereas acidic galactosidases appear to have other functions. Glycoside hydrolase family 36 can be split into 11 families, GH36A to GH36K. This family includes enzymes from GH36C.
166325 PLN02684 1.23e-49 392 711 202 536
Probable galactinol--sucrose galactosyltransferase
165863 PLN02219 1.85e-48 387 860 194 686
probable galactinol--sucrose galactosyltransferase 2
215203 PLN02355 5.93e-48 389 951 203 758
probable galactinol--sucrose galactosyltransferase 1
215381 PLN02711 2.78e-38 392 905 213 761
Probable galactinol--sucrose galactosyltransferase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.37e-289 21 955 36 955
1.94e-289 21 955 36 955
2.48e-277 21 955 22 937
2.48e-277 21 955 22 937
4.26e-273 21 955 22 938

PDB Hits      help

PV07_09613-t44_1-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.93e-44 387 859 193 684
Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=RFS2 PE=2 SV=2
2.48e-41 392 898 204 713
Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis thaliana OX=3702 GN=RFS6 PE=2 SV=2
2.56e-40 387 888 196 710
Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=RFS1 PE=2 SV=1
2.38e-33 392 745 222 607
Probable galactinol--sucrose galactosyltransferase 5 OS=Arabidopsis thaliana OX=3702 GN=RFS5 PE=1 SV=1
2.98e-32 392 745 225 605
Galactinol--sucrose galactosyltransferase OS=Oryza sativa subsp. japonica OX=39947 GN=RFS PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000039 0.000002

TMHMM  Annotations      help

There is no transmembrane helices in PV07_09613-t44_1-p1.