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CAZyme Information: PV06_07018-t43_1-p1

You are here: Home > Sequence: PV06_07018-t43_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Exophiala oligosperma
Lineage Ascomycota; Eurotiomycetes; ; Herpotrichiellaceae; Exophiala; Exophiala oligosperma
CAZyme ID PV06_07018-t43_1-p1
CAZy Family GH47
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
478 52062.89 4.1712
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_EoligospermaCBS72588 11938 N/A 45 11893
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.-:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 34 475 7.6e-159 0.9909706546275395

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
227807 XynC 7.67e-21 33 475 33 426
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
307945 Glyco_hydro_30 1.14e-10 68 363 19 316
Glycosyl hydrolase family 30 TIM-barrel domain.
407314 Glyco_hydro_30C 1.83e-04 388 440 1 54
Glycosyl hydrolase family 30 beta sandwich domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
5.81e-264 22 477 16 464
5.81e-264 22 477 16 464
7.86e-262 22 477 16 464
2.14e-259 22 477 16 464
2.49e-258 23 477 17 464

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.24e-90 34 475 22 469
Chain A, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612],6IUJ_B Chain B, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612]
3.08e-89 36 475 95 540
Crystal structure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris [Saccharomyces uvarum],6KRN_A Crystal structure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris in complex with aldotriuronic acid [Saccharomyces uvarum]
5.20e-78 36 477 5 447
Chain A, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464],7O0E_G Chain G, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
8.90e-77 36 477 12 454
Chain AAA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
2.00e-74 36 478 25 454
Chain A, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612],6M5Z_B Chain B, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.75e-78 36 477 29 471
GH30 family xylanase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Xyn30A PE=1 SV=1
2.96e-08 36 420 87 482
Putative glucosylceramidase 1 OS=Caenorhabditis elegans OX=6239 GN=gba-1 PE=1 SV=2
5.44e-07 132 475 98 419
Glucuronoxylanase XynC OS=Bacillus subtilis OX=1423 GN=xynC PE=3 SV=2
9.54e-07 132 478 97 421
Glucuronoxylanase XynC OS=Bacillus subtilis (strain 168) OX=224308 GN=xynC PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000223 0.999748 CS pos: 23-24. Pr: 0.9734

TMHMM  Annotations      download full data without filtering help

Start End
7 26