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CAZyme Information: PV06_05680-t43_1-p1

You are here: Home > Sequence: PV06_05680-t43_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Exophiala oligosperma
Lineage Ascomycota; Eurotiomycetes; ; Herpotrichiellaceae; Exophiala; Exophiala oligosperma
CAZyme ID PV06_05680-t43_1-p1
CAZy Family GH17
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
479 KN847336.1|CGC3 50810.27 4.7459
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_EoligospermaCBS72588 11938 N/A 45 11893
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PV06_05680-t43_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA12 28 427 2.8e-162 0.9925187032418953

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225044 YliI 2.46e-23 29 395 43 390
Glucose/arabinose dehydrogenase, beta-propeller fold [Carbohydrate transport and metabolism].
380207 ScyE_fam 6.69e-04 46 74 1 29
ScyD/ScyE family protein. This family includes ScyE, a protein involved in scytomenin biosynthesis and export, and its paralog ScyD. Some members of the family contain a C-terminal PEP-CTERM domain that predictions anchoring to the outer membrane.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.42e-144 18 439 16 436
6.46e-132 10 433 10 434
3.41e-130 8 433 7 436
2.27e-128 10 429 10 448
9.69e-128 1 435 1 442

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.54e-119 37 430 11 403
Iodide structure of Trichoderma reesei Carbohydrate-Active Enzymes Family AA12 [Trichoderma reesei RUT C-30]
9.85e-119 37 430 12 404
Native structure of Trichoderma reesei Carbohydrate-Active Enzymes Family AA12 [Trichoderma reesei RUT C-30]
1.02e-118 37 430 13 405
Calcium structure of Trichoderma reesei Carbohydrate-Active Enzymes Family AA12 [Trichoderma reesei RUT C-30]
3.30e-70 26 429 4 410
Chain A, Extracellular PQQ-dependent sugar dehydrogenase [Coprinopsis cinerea],6JWF_A Chain A, Extracellular PQQ-dependent sugar dehydrogenase [Coprinopsis cinerea],6JWF_B Chain B, Extracellular PQQ-dependent sugar dehydrogenase [Coprinopsis cinerea]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.18e-07 5 369 10 323
Uncharacterized protein BB_0024 OS=Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31) OX=224326 GN=BB_0024 PE=4 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000283 0.999700 CS pos: 21-22. Pr: 0.9788

TMHMM  Annotations      help

There is no transmembrane helices in PV06_05680-t43_1-p1.