logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: PV06_04207-t43_1-p1

You are here: Home > Sequence: PV06_04207-t43_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Exophiala oligosperma
Lineage Ascomycota; Eurotiomycetes; ; Herpotrichiellaceae; Exophiala; Exophiala oligosperma
CAZyme ID PV06_04207-t43_1-p1
CAZy Family GH13
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1071 115594.92 4.3078
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_EoligospermaCBS72588 11938 N/A 45 11893
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PV06_04207-t43_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 299 824 5.9e-57 0.6237864077669902

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
407266 Glyco_hydro_106 6.54e-14 332 796 427 873
alpha-L-rhamnosidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.96e-304 27 1067 19 1012
2.44e-302 28 1067 21 994
4.76e-302 29 1067 25 1016
3.49e-295 37 1067 31 1001
3.49e-295 37 1067 31 1001

PDB Hits      help

PV06_04207-t43_1-p1 has no PDB hit.

Swiss-Prot Hits      help

PV06_04207-t43_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000214 0.999761 CS pos: 22-23. Pr: 0.9817

TMHMM  Annotations      download full data without filtering help

Start End
5 22