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CAZyme Information: PV06_03500-t43_1-p1

You are here: Home > Sequence: PV06_03500-t43_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Exophiala oligosperma
Lineage Ascomycota; Eurotiomycetes; ; Herpotrichiellaceae; Exophiala; Exophiala oligosperma
CAZyme ID PV06_03500-t43_1-p1
CAZy Family GH1
CAZyme Description hypothetical protein, variant
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
623 KN847334.1|CGC14 71324.03 5.9208
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_EoligospermaCBS72588 11938 N/A 45 11893
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PV06_03500-t43_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH15 267 587 7e-60 0.814404432132964

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225922 SGA1 2.20e-92 12 586 15 540
Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family [Carbohydrate transport and metabolism].
395586 Glyco_hydro_15 5.27e-65 263 587 1 314
Glycosyl hydrolases family 15. In higher organisms this family is represented by phosphorylase kinase subunits.
273702 oligosac_amyl 0.001 271 337 260 322
oligosaccharide amylase. The name of this type of amylase is based on the characterization of an glucoamylase family enzyme from Thermoactinomyces vulgaris. The T. vulgaris enzyme was expressed in E. coli and, like other glucoamylases, it releases beta-D-glucose from starch. However, unlike previously characterized glucoamylases, this T. vulgaris amylase hydrolyzes maltooligosaccharides (maltotetraose, maltose) more efficiently than starch (1), indicating this enzyme belongs to a class of glucoamylase-type enzymes with oligosaccharide-metabolizing activity.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.68e-216 11 587 75 658
1.40e-214 11 587 104 688
2.39e-213 11 587 18 616
2.98e-212 11 587 47 629
2.98e-212 11 587 47 629

PDB Hits      help

PV06_03500-t43_1-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.20e-171 12 587 18 571
Uncharacterized protein C4H3.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC4H3.03c PE=4 SV=1
6.92e-92 13 587 42 585
Trehalase OS=Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) OX=246196 GN=MSMEG_4535 PE=1 SV=1
5.20e-90 13 587 54 597
Trehalase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv2402 PE=1 SV=2
7.18e-90 3 587 21 547
Trehalase OS=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) OX=273116 GN=TVG1381191 PE=1 SV=1
9.82e-84 27 587 2 505
Trehalase OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) OX=273075 GN=Ta0286 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000045 0.000001

TMHMM  Annotations      help

There is no transmembrane helices in PV06_03500-t43_1-p1.