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CAZyme Information: PUG3_T013901-RA-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Globisporangium ultimum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Pythiaceae; Globisporangium; Globisporangium ultimum | |||||||||||
| CAZyme ID | PUG3_T013901-RA-p1 | |||||||||||
| CAZy Family | GT66 | |||||||||||
| CAZyme Description | Endopolygalacturonase 8 | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:10 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 45 | 214 | 8.8e-36 | 0.5415384615384615 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 6.93e-39 | 51 | 217 | 3 | 176 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 227721 | Pgu1 | 1.90e-10 | 89 | 209 | 188 | 317 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| 178580 | PLN03003 | 3.23e-10 | 57 | 213 | 59 | 222 | Probable polygalacturonase At3g15720 |
| 215540 | PLN03010 | 1.32e-08 | 87 | 213 | 122 | 241 | polygalacturonase |
| 215120 | PLN02188 | 1.89e-07 | 99 | 206 | 122 | 232 | polygalacturonase/glycoside hydrolase family protein |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.24e-92 | 1 | 217 | 1 | 216 | |
| 3.38e-90 | 4 | 217 | 2 | 216 | |
| 5.49e-89 | 1 | 217 | 1 | 216 | |
| 1.10e-88 | 18 | 217 | 16 | 216 | |
| 1.39e-88 | 1 | 217 | 1 | 235 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.51e-40 | 29 | 216 | 6 | 198 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 1.51e-40 | 29 | 216 | 6 | 198 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 3.52e-40 | 32 | 216 | 1 | 190 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 1.57e-38 | 32 | 216 | 1 | 191 | Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini] |
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| 2.21e-38 | 34 | 216 | 4 | 195 | Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5.70e-45 | 13 | 210 | 10 | 212 | Polygalacturonase OS=Cochliobolus carbonum OX=5017 GN=PGN1 PE=3 SV=1 |
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| 5.13e-44 | 9 | 216 | 13 | 225 | Polygalacturonase OS=Penicillium janthinellum OX=5079 PE=3 SV=1 |
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| 1.52e-41 | 1 | 216 | 1 | 221 | Endopolygalacturonase I OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pgaI PE=1 SV=1 |
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| 1.52e-41 | 1 | 216 | 1 | 221 | Probable endopolygalacturonase I OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pgaI PE=3 SV=1 |
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| 1.52e-41 | 1 | 216 | 1 | 221 | Endopolygalacturonase B OS=Aspergillus flavus (strain ATCC MYA-384 / AF70) OX=1392242 GN=pgaB PE=2 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000218 | 0.999776 | CS pos: 27-28. Pr: 0.4577 |