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CAZyme Information: PUG3_T013636-RA-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Globisporangium ultimum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Pythiaceae; Globisporangium; Globisporangium ultimum | |||||||||||
| CAZyme ID | PUG3_T013636-RA-p1 | |||||||||||
| CAZy Family | GT57 | |||||||||||
| CAZyme Description | Polygalacturonase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:10 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 44 | 237 | 4.1e-38 | 0.5969230769230769 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 4.27e-49 | 48 | 236 | 1 | 191 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 178580 | PLN03003 | 1.39e-13 | 86 | 235 | 95 | 241 | Probable polygalacturonase At3g15720 |
| 215426 | PLN02793 | 3.70e-12 | 74 | 235 | 112 | 280 | Probable polygalacturonase |
| 215540 | PLN03010 | 6.28e-12 | 100 | 235 | 139 | 260 | polygalacturonase |
| 177865 | PLN02218 | 1.48e-11 | 106 | 235 | 164 | 295 | polygalacturonase ADPG |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 4.15e-78 | 25 | 244 | 6 | 218 | |
| 7.99e-78 | 10 | 244 | 11 | 240 | |
| 1.46e-77 | 9 | 244 | 8 | 237 | |
| 3.74e-76 | 10 | 244 | 11 | 240 | |
| 1.00e-75 | 22 | 244 | 24 | 239 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5.00e-43 | 30 | 236 | 3 | 211 | Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus] |
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| 9.22e-43 | 29 | 236 | 1 | 206 | Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger] |
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| 7.67e-41 | 31 | 236 | 3 | 206 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 9.14e-41 | 31 | 236 | 11 | 214 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 9.14e-41 | 31 | 236 | 11 | 214 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.42e-47 | 31 | 243 | 39 | 253 | Polygalacturonase OS=Penicillium griseoroseum OX=84562 GN=PGG1 PE=3 SV=1 |
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| 1.92e-45 | 29 | 235 | 32 | 236 | Endopolygalacturonase B OS=Aspergillus flavus (strain ATCC MYA-384 / AF70) OX=1392242 GN=pgaB PE=2 SV=2 |
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| 1.92e-45 | 29 | 235 | 32 | 236 | Probable endopolygalacturonase I OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pgaI PE=3 SV=1 |
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| 1.92e-45 | 29 | 235 | 32 | 236 | Endopolygalacturonase I OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pgaI PE=1 SV=1 |
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| 2.95e-45 | 25 | 236 | 32 | 241 | Polygalacturonase OS=Penicillium janthinellum OX=5079 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000231 | 0.999735 | CS pos: 19-20. Pr: 0.9770 |