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CAZyme Information: PUG3_T013560-RA-p1

You are here: Home > Sequence: PUG3_T013560-RA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Globisporangium ultimum
Lineage Oomycota; NA; ; Pythiaceae; Globisporangium; Globisporangium ultimum
CAZyme ID PUG3_T013560-RA-p1
CAZy Family GT49
CAZyme Description Pectin lyase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
310 33240.77 9.4376
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_GultimumBR650 14086 1223559 0 14086
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.10:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 126 309 1.6e-71 0.9251336898395722

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
214765 Amb_all 1.05e-28 125 307 2 173
Amb_all domain.
226384 PelB 1.53e-07 100 304 51 255
Pectate lyase [Carbohydrate transport and metabolism].
366158 Pec_lyase_C 7.23e-05 106 307 2 198
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.27e-147 1 307 1 299
2.27e-147 1 307 1 299
2.27e-147 1 307 1 299
1.03e-143 20 307 54 333
1.57e-135 1 307 1 302

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
8.40e-65 25 307 5 263
Pectin Lyase A [Aspergillus niger]
8.40e-65 24 307 4 263
Pectin Lyase B [Aspergillus niger]
1.62e-61 25 307 5 263
Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.78e-76 1 309 1 285
Probable pectin lyase F-2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pelF-2 PE=3 SV=1
3.52e-74 8 309 7 284
Pectin lyase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pelB PE=2 SV=1
2.64e-72 16 307 18 285
Probable pectin lyase F OS=Aspergillus niger OX=5061 GN=pelF PE=3 SV=1
2.64e-72 16 307 18 285
Probable pectin lyase F OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pelF PE=3 SV=1
9.06e-72 25 280 26 263
Pectin lyase OS=Colletotrichum gloeosporioides OX=474922 GN=PNLA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000263 0.999724 CS pos: 21-22. Pr: 0.9807

TMHMM  Annotations      download full data without filtering help

Start End
7 29