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CAZyme Information: PUG3_T012190-RA-p1

You are here: Home > Sequence: PUG3_T012190-RA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Globisporangium ultimum
Lineage Oomycota; NA; ; Pythiaceae; Globisporangium; Globisporangium ultimum
CAZyme ID PUG3_T012190-RA-p1
CAZy Family GT20
CAZyme Description Whole genome shotgun sequence assembly, scaffold_29
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
301 PultBR650_SC2060|CGC1 32838.66 4.7288
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_GultimumBR650 14086 1223559 0 14086
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PUG3_T012190-RA-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH131 63 262 4.3e-23 0.8274509803921568

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
408085 GH131_N 9.46e-58 27 262 1 250
Glycoside hydrolase 131 catalytic N-terminal domain. This is the N-terminal domain found in glycoside hydrolase family 131 (GH131A) protein observed in Coprinopsis cinerea. GH131A exhibits bifunctional exo-beta-1,3-/-1,6- and endo-beta-1,4 activity toward beta-glucan. This domain is catalytic in nature though the catalytic mechanism of C. cinerea GH131A is different from that of typical glycosidases that use a pair of carboxylic acid residues as the catalytic residues. In the case of GH131A, Glu98 and His218 may form a catalytic dyad and Glu98 may activate His218 during catalysis.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
9.26e-97 12 266 7 257
2.82e-87 3 261 8 262
2.04e-86 3 261 344 598
5.94e-25 14 269 9 263
1.98e-11 61 234 57 223

PDB Hits      help

PUG3_T012190-RA-p1 has no PDB hit.

Swiss-Prot Hits      help

PUG3_T012190-RA-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000233 0.999741 CS pos: 22-23. Pr: 0.9783

TMHMM  Annotations      help

There is no transmembrane helices in PUG3_T012190-RA-p1.