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CAZyme Information: PUG3_T010337-RA-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Globisporangium ultimum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Pythiaceae; Globisporangium; Globisporangium ultimum | |||||||||||
| CAZyme ID | PUG3_T010337-RA-p1 | |||||||||||
| CAZy Family | GH72 | |||||||||||
| CAZyme Description | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE11 | 121 | 259 | 2.4e-34 | 0.45387453874538747 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 397424 | LpxC | 1.66e-83 | 1 | 259 | 31 | 270 | UDP-3-O-acyl N-acetylglycosamine deacetylase. The enzymes in this family catalyze the second step in the biosynthetic pathway for lipid A. |
| 237294 | lpxC | 1.37e-75 | 1 | 272 | 34 | 286 | UDP-3-O-acyl-N-acetylglucosamine deacetylase. |
| 223845 | LpxC | 1.02e-61 | 1 | 272 | 34 | 289 | UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell wall/membrane/envelope biogenesis]. |
| 273014 | lpxC | 3.96e-43 | 1 | 266 | 33 | 279 | UDP-3-0-acyl N-acetylglucosamine deacetylase. UDP-3-O-(R-3-hydroxymyristoyl)-GlcNAc deacetylase from E. coli , LpxC, was previously designated EnvA. This enzyme is involved in lipid-A precursor biosynthesis. It is essential for cell viability. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides] |
| 237296 | PRK13188 | 2.34e-38 | 1 | 266 | 35 | 306 | bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.76e-49 | 153 | 268 | 1 | 113 | |
| 2.94e-37 | 22 | 272 | 50 | 286 | |
| 2.94e-37 | 22 | 272 | 50 | 286 | |
| 3.15e-36 | 22 | 272 | 50 | 286 | |
| 6.20e-36 | 22 | 272 | 50 | 286 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.27e-30 | 1 | 266 | 39 | 288 | Structure of LpxC from Yersinia enterocolitica Complexed with CHIR090 Inhibitor [Yersinia enterocolitica],3NZK_B Structure of LpxC from Yersinia enterocolitica Complexed with CHIR090 Inhibitor [Yersinia enterocolitica] |
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| 3.08e-30 | 1 | 268 | 34 | 285 | Structure of LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine [Escherichia coli],4MDT_B Structure of LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine [Escherichia coli],4MDT_C Structure of LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine [Escherichia coli],4MDT_D Structure of LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine [Escherichia coli] |
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| 7.60e-30 | 1 | 268 | 34 | 285 | Crystal Structure of the Escherichia coli LpxC/LPC-009 complex [Escherichia coli IHE3034],3PS1_A Crystal structure of the Escherichia Coli LPXC/LPC-011 complex [Escherichia coli IHE3034],3PS2_A Crystal structure of the Escherichia Coli LPXC/LPC-012 complex [Escherichia coli IHE3034],3PS3_A Crystal structure of the Escherichia Coli LPXC/LPC-053 complex [Escherichia coli IHE3034],4IS9_A Crystal Structure of the Escherichia coli LpxC/L-161,240 complex [Escherichia coli IHE3034],4IS9_B Crystal Structure of the Escherichia coli LpxC/L-161,240 complex [Escherichia coli IHE3034],4ISA_A Crystal Structure of the Escherichia coli LpxC/BB-78485 complex [Escherichia coli IHE3034] |
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| 8.38e-30 | 1 | 268 | 34 | 285 | Crystal Structure of the Escherichia coli LpxC/LPC-138 complex [Escherichia coli] |
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| 1.98e-27 | 1 | 268 | 36 | 286 | Pseudomonas aeruginosa LpxC in complex with CHIR-090 [Pseudomonas aeruginosa PAO1] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 9.57e-39 | 22 | 272 | 50 | 286 | UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Geobacter sp. (strain M21) OX=443144 GN=lpxC PE=3 SV=1 |
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| 5.22e-38 | 22 | 272 | 50 | 286 | UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Citrifermentans bemidjiense (strain ATCC BAA-1014 / DSM 16622 / JCM 12645 / Bem) OX=404380 GN=lpxC PE=3 SV=1 |
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| 3.95e-33 | 1 | 269 | 34 | 283 | UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Syntrophotalea carbinolica (strain DSM 2380 / NBRC 103641 / GraBd1) OX=338963 GN=lpxC PE=3 SV=1 |
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| 5.08e-33 | 36 | 266 | 62 | 283 | UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Mannheimia succiniciproducens (strain MBEL55E) OX=221988 GN=lpxC PE=3 SV=1 |
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| 1.04e-32 | 27 | 272 | 55 | 289 | UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) OX=342108 GN=lpxC PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000051 | 0.000000 |