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CAZyme Information: PUG3_T010097-RA-p1

You are here: Home > Sequence: PUG3_T010097-RA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Globisporangium ultimum
Lineage Oomycota; NA; ; Pythiaceae; Globisporangium; Globisporangium ultimum
CAZyme ID PUG3_T010097-RA-p1
CAZy Family GH6
CAZyme Description Transmembrane protein 5
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
598 67700.80 8.9815
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_GultimumBR650 14086 1223559 0 14086
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.2.-:5

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT110 320 499 2.4e-17 0.898876404494382

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
397245 Exostosin 8.50e-04 463 499 217 253
Exostosin family. The EXT family is a family of tumor suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.99e-15 196 595 37 406
3.42e-14 317 552 165 366
1.98e-12 296 588 169 427
2.82e-12 303 589 140 389
2.89e-12 250 589 83 396

PDB Hits      help

PUG3_T010097-RA-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.06e-10 302 589 174 424
Ribitol-5-phosphate xylosyltransferase 1 OS=Danio rerio OX=7955 GN=rxylt1 PE=2 SV=2
2.26e-09 296 587 172 429
Ribitol-5-phosphate xylosyltransferase 1 OS=Homo sapiens OX=9606 GN=RXYLT1 PE=1 SV=1
1.62e-08 296 587 173 430
Ribitol-5-phosphate xylosyltransferase 1 OS=Mus musculus OX=10090 GN=Rxylt1 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000083 0.000001

TMHMM  Annotations      download full data without filtering help

Start End
13 35
102 124