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CAZyme Information: PUG3_T009088-RA-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Globisporangium ultimum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Pythiaceae; Globisporangium; Globisporangium ultimum | |||||||||||
| CAZyme ID | PUG3_T009088-RA-p1 | |||||||||||
| CAZy Family | GH5 | |||||||||||
| CAZyme Description | Choline dehydrogenase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 18 | 462 | 2.5e-57 | 0.846830985915493 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 225186 | BetA | 1.38e-48 | 18 | 470 | 8 | 460 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| 235000 | PRK02106 | 3.20e-41 | 17 | 465 | 5 | 454 | choline dehydrogenase; Validated |
| 366272 | GMC_oxred_N | 7.46e-27 | 83 | 297 | 24 | 218 | GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
| 215420 | PLN02785 | 8.68e-11 | 207 | 378 | 234 | 409 | Protein HOTHEAD |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 4.65e-194 | 15 | 469 | 80 | 565 | |
| 2.76e-37 | 18 | 462 | 6 | 444 | |
| 1.42e-33 | 18 | 466 | 50 | 522 | |
| 1.09e-30 | 9 | 363 | 219 | 593 | |
| 5.51e-30 | 21 | 469 | 28 | 480 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.42e-31 | 12 | 363 | 2 | 378 | Chain A, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis] |
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| 6.42e-31 | 18 | 363 | 8 | 378 | Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis] |
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| 8.69e-31 | 18 | 363 | 8 | 378 | Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis] |
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| 8.69e-31 | 18 | 363 | 8 | 378 | Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis] |
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| 9.59e-31 | 18 | 363 | 24 | 394 | Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_B Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_C Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_D Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_E Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_F Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5.44e-34 | 18 | 399 | 5 | 395 | L-sorbose 1-dehydrogenase OS=Gluconobacter oxydans OX=442 PE=3 SV=1 |
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| 6.56e-30 | 18 | 363 | 84 | 454 | Fatty acid photodecarboxylase, chloroplastic OS=Chlorella variabilis OX=554065 GN=FAP PE=1 SV=1 |
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| 9.89e-30 | 18 | 363 | 46 | 415 | Fatty acid photodecarboxylase, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=FAP PE=1 SV=1 |
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| 5.64e-29 | 18 | 399 | 34 | 455 | Dehydrogenase eriK OS=Hericium erinaceus OX=91752 GN=eriK PE=3 SV=1 |
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| 1.37e-28 | 18 | 462 | 14 | 444 | Choline oxidase OS=Arthrobacter globiformis OX=1665 GN=codA PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000010 | 0.000013 |