CAZyme Information: PUG3_T000979-RA-p1

Basic Information

• Species: Globisporangium ultimum
• Lineage: Oomycota; NA; ; Pythiaceae; Globisporangium; Globisporangium ultimum
• CAZyme ID: PUG3_T000979-RA-p1
• CAZy Family: AA17
• CAZyme Description: Choline dehydrogenase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
465		52003.54	8.6339

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_GultimumBR650	14086	1223559	0	14086

• Gene Location: location=PultBR650_SC0035:42989-44745(-)

Full Sequence      

MLRHSIHRGASLQHKRSLLKSASTASRALSSQAPSPQTEDDRNKWDSWKIHMPAALTFNL
ADDKYNWYYHTEPQKNLDNRRLPWPRGRVLGGSSSLNAMVYIRGHAHDYDDWQASGAEGW
SYADCLPRGNQKDQVLFKKFIEAGIQAGYPYTDDMNGYQQEGFGWMDMTIHKGRRWSAAT
AYLHPATSRKNLTVITDTFVNKVIFEGKKAVGIDTENNKSKTKTQIRAAKEIILSGGAIN
SPQLLMLSGVGDAEHLKDVGIPVVQHLPAVGQNMEDHLDLYIQYKCKKPITLHNATWKYP
HNMVAIALEWLLNRTGMGASAHLESGGFIRSAPGKQFPDVQYHFLPGSLTGQLTPGPYHA
MQAHCSPMRATSRGWLKLRSANPRDHPIIEPNYLDTEEDKVDLRNAVRLTREIFEQKVFD
EYRGDAVSPAQDVQSDAEIDARACTDSRTCASSTRPSCPTSSAAT

Enzyme Prediction     

No EC number prediction in PUG3_T000979-RA-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
AA3	136	450	6.2e-80	0.596830985915493

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
235000	PRK02106	0.0	47	441	45	462	choline dehydrogenase; Validated
225186	BetA	1.89e-133	46	449	43	471	Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
366272	GMC_oxred_N	4.57e-60	78	279	15	218	GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
215420	PLN02785	3.16e-18	86	422	127	476	Protein HOTHEAD
398739	GMC_oxred_C	5.88e-11	371	449	2	85	GMC oxidoreductase. This domain found associated with pfam00732.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UIZ28087.1|AA3_2	1.11e-246	40	440	62	487
ANI26486.1|AA3_2	3.22e-167	47	441	115	530
CAB3230510.1|AA3_2	2.70e-165	47	458	69	498
AWP09430.1|AA3_2	2.42e-162	47	441	64	479
CEF60566.1|AA3_2	9.78e-144	42	440	68	495

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6ZH7_A	3.39e-43	50	440	48	488	Chain A, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
6YRU_AAA	3.39e-43	50	440	48	488	Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
5NCC_A	4.12e-43	50	440	64	504	Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_B Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_C Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_D Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_E Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_F Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis]
6YS1_AAA	4.66e-43	50	440	48	488	Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
6YS2_AAA	6.42e-43	50	440	48	488	Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q8NE62|CHDH_HUMAN	8.76e-168	47	441	85	500	Choline dehydrogenase, mitochondrial OS=Homo sapiens OX=9606 GN=CHDH PE=1 SV=2
sp|Q6UPE0|CHDH_RAT	2.93e-167	48	441	91	505	Choline dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Chdh PE=1 SV=1
sp|Q8BJ64|CHDH_MOUSE	7.54e-167	48	441	88	502	Choline dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Chdh PE=1 SV=1
sp|B0CKN4|BETA_BRUSI	5.99e-133	50	440	43	453	Oxygen-dependent choline dehydrogenase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) OX=470137 GN=betA PE=3 SV=1
sp|Q8G1Z8|BETA_BRUSU	5.99e-133	50	440	43	453	Oxygen-dependent choline dehydrogenase OS=Brucella suis biovar 1 (strain 1330) OX=204722 GN=betA PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000057	0.000000

TMHMM  Annotations     

There is no transmembrane helices in PUG3_T000979-RA-p1.