You are browsing environment: FUNGIDB
CAZyme Information: PSURA_86772T0-p1
You are here: Home > Sequence: PSURA_86772T0-p1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora ramorum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum | |||||||||||
| CAZyme ID | PSURA_86772T0-p1 | |||||||||||
| CAZy Family | GT8 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH6 | 44 | 297 | 9.6e-61 | 0.935374149659864 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 396075 | Glyco_hydro_6 | 1.33e-42 | 48 | 297 | 2 | 287 | Glycosyl hydrolases family 6. |
| 227616 | CelA1 | 7.28e-17 | 86 | 387 | 180 | 487 | Cellulase/cellobiase CelA1 [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 9.98e-186 | 6 | 359 | 2 | 353 | |
| 3.66e-92 | 23 | 333 | 19 | 335 | |
| 4.02e-84 | 22 | 329 | 15 | 324 | |
| 1.66e-81 | 20 | 334 | 7 | 314 | |
| 1.54e-80 | 19 | 327 | 9 | 306 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.82e-28 | 94 | 309 | 73 | 283 | Structure of the endoglucanase Cel6 from Mycobacterium tuberculosis in complex with METHYL-CELLOBIOSYL-4-DEOXY-4-THIO-BETA-D-CELLOBIOSIDE at 1.6 angstrom [Mycobacterium tuberculosis H37Rv] |
|
| 3.82e-28 | 94 | 309 | 73 | 283 | Structure of the endoglucanase Cel6 from Mycobacterium tuberculosis in complex with cellobiose at 1.75 angstrom [Mycobacterium tuberculosis H37Rv] |
|
| 5.77e-28 | 94 | 309 | 94 | 304 | Structure of the endoglucanase Cel6 from Mycobacterium tuberculosis in complex with thiocellopentaose at 1.1 angstrom [Mycobacterium tuberculosis H37Rv] |
|
| 9.88e-28 | 94 | 309 | 73 | 283 | Structure of the endoglucanase Cel6 from Mycobacterium tuberculosis in complex with glucose-isofagomine at 1.9 angstrom [Mycobacterium tuberculosis H37Rv] |
|
| 2.17e-27 | 94 | 306 | 70 | 274 | CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF A THERMOPHILIC ENDOCELLULASE [Thermobifida fusca],2BOD_X Catalytic domain of endo-1,4-glucanase Cel6A from Thermobifida fusca in complex with methyl cellobiosyl-4-thio-beta-cellobioside [Thermobifida fusca] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.14e-28 | 65 | 301 | 75 | 306 | Endoglucanase A OS=Thermobispora bispora OX=2006 GN=celA PE=3 SV=1 |
|
| 5.31e-26 | 94 | 309 | 238 | 438 | Endoglucanase A OS=Cellulomonas fimi OX=1708 GN=cenA PE=1 SV=1 |
|
| 1.22e-25 | 94 | 306 | 101 | 305 | Endoglucanase E-2 OS=Thermobifida fusca OX=2021 GN=celB PE=1 SV=2 |
|
| 1.09e-22 | 88 | 307 | 77 | 331 | Endoglucanase-6B OS=Humicola insolens OX=34413 GN=cel6B PE=1 SV=1 |
|
| 2.26e-21 | 92 | 307 | 104 | 349 | Probable exoglucanase GH6D OS=Podospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383) OX=515849 GN=GH6D PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000372 | 0.999622 | CS pos: 29-30. Pr: 0.9703 |