logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: PSURA_86725T0-p1

You are here: Home > Sequence: PSURA_86725T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora ramorum
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum
CAZyme ID PSURA_86725T0-p1
CAZy Family GT71|GT71|GT71
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
477 53143.17 4.4369
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PramorumPr-102 15743 N/A 251 15492
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.1.122:14

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT31 226 422 4.5e-36 0.9791666666666666

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
250845 Galactosyl_T 4.96e-24 226 424 3 196
Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2.
215596 PLN03133 4.27e-07 204 413 380 579
beta-1,3-galactosyltransferase; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.04e-18 207 428 53 259
1.58e-18 209 462 78 324
1.58e-18 209 462 78 324
1.58e-18 209 462 78 324
1.58e-18 209 462 78 324

PDB Hits      help

PSURA_86725T0-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.81e-19 209 462 78 324
Beta-1,3-galactosyltransferase 1 OS=Homo sapiens OX=9606 GN=B3GALT1 PE=1 SV=1
2.81e-19 209 462 78 324
Beta-1,3-galactosyltransferase 1 OS=Gorilla gorilla gorilla OX=9595 GN=B3GALT1 PE=3 SV=1
2.81e-19 209 462 78 324
Beta-1,3-galactosyltransferase 1 OS=Pan paniscus OX=9597 GN=B3GALT1 PE=3 SV=1
2.81e-19 209 462 78 324
Beta-1,3-galactosyltransferase 1 OS=Pan troglodytes OX=9598 GN=B3GALT1 PE=3 SV=1
2.81e-19 209 462 78 324
Beta-1,3-galactosyltransferase 1 OS=Mus musculus OX=10090 GN=B3galt1 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000238 0.999756 CS pos: 18-19. Pr: 0.9657

TMHMM  Annotations      help

There is no transmembrane helices in PSURA_86725T0-p1.