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CAZyme Information: PSURA_86503T0-p1

You are here: Home > Sequence: PSURA_86503T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora ramorum
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum
CAZyme ID PSURA_86503T0-p1
CAZy Family GT71
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
197 22309.28 4.5457
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PramorumPr-102 15743 N/A 251 15492
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PSURA_86503T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT60 68 197 1.8e-25 0.42727272727272725

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
371506 GlcNAc 2.79e-09 72 197 8 160
Glycosyltransferase (GlcNAc). GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1, a ubiquitous eukaryotic protein, in the cytoplasm.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.85e-73 37 197 43 203
8.60e-71 5 197 7 203
3.49e-62 19 197 3 181
1.46e-61 4 197 7 197
8.47e-20 73 197 94 213

PDB Hits      help

PSURA_86503T0-p1 has no PDB hit.

Swiss-Prot Hits      help

PSURA_86503T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000259 0.999711 CS pos: 18-19. Pr: 0.9791

TMHMM  Annotations      help

There is no transmembrane helices in PSURA_86503T0-p1.