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CAZyme Information: PSURA_86201T0-p1

You are here: Home > Sequence: PSURA_86201T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora ramorum
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum
CAZyme ID PSURA_86201T0-p1
CAZy Family GT71
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
287 29967.65 4.1306
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PramorumPr-102 15743 N/A 251 15492
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PSURA_86201T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 14 258 9.9e-66 0.9224489795918367

CDD Domains      help

PSURA_86201T0-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.75e-124 1 199 1 199
5.53e-124 1 199 1 199
4.38e-118 1 200 1 200
1.66e-92 1 200 1 177
4.09e-75 7 200 8 205

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.79e-13 90 195 55 174
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PSURA_86201T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000929 0.999038 CS pos: 17-18. Pr: 0.7243

TMHMM  Annotations      help

There is no transmembrane helices in PSURA_86201T0-p1.