CAZyme Information: PSURA_86016T0-p1

Basic Information

• Species: Phytophthora ramorum
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum
• CAZyme ID: PSURA_86016T0-p1
• CAZy Family: GT71
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
236		24781.93	4.1549

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PramorumPr-102	15743	N/A	251	15492

• Gene Location: location=PramPr-102_SC0418:12436-13146(+)

Full Sequence      

MAAEKKMSVRDVVLDMVKDKKCGYTRTDVDPQPIPTDGKVKWWGNGGGGFTHTGPCEIYI
DDTMVLHGDDCEEEYPGGPDGSNKMSEMPVDYSSCNGECTLTIYWLAFQNAQWQAYVNCV
PLKGSGSATQTQTQTSSAESSADQQTAEAPSTETQSAAGSSTGNESTDAPAATTQSTEAP
STETQSAEGSSAGTESTDAPAATEAPSTETQATPAPATETKCNAPARRLRKKVTVL

Enzyme Prediction     

No EC number prediction in PSURA_86016T0-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
AA17	3	195	1.6e-53	0.689795918367347

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
236776	PRK10856	3.49e-06	127	226	151	248	cytoskeleton protein RodZ.
237019	PRK11907	1.09e-05	145	220	33	105	bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase.
237030	kgd	3.75e-05	137	231	37	129	multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.
237030	kgd	6.24e-05	142	230	34	121	multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.
139494	PRK13335	9.68e-05	125	225	55	152	superantigen-like protein SSL3; Reviewed.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ETI54331.1|AA17	7.71e-88	1	236	1	236
ETN14458.1|AA17	1.06e-87	1	236	64	299
ETP24148.1|AA17	1.28e-87	1	236	70	305
ETO83080.1|AA17	6.05e-87	1	236	64	299
ETN14460.1|AA17	6.05e-87	1	236	64	299

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6Z5Y_A	1.81e-22	20	124	68	172	Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits     

PSURA_86016T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000055	0.000000

TMHMM  Annotations     

There is no transmembrane helices in PSURA_86016T0-p1.