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CAZyme Information: PSURA_84947T0-p1

You are here: Home > Sequence: PSURA_84947T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora ramorum
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum
CAZyme ID PSURA_84947T0-p1
CAZy Family GT71
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
265 PramPr-102_SC0131|CGC1 27849.59 4.3059
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PramorumPr-102 15743 N/A 251 15492
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PSURA_84947T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 11 254 3.2e-62 0.9714285714285714

CDD Domains      help

PSURA_84947T0-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.72e-125 1 264 1 267
3.34e-125 1 264 20 286
6.99e-125 1 264 1 267
5.76e-115 1 264 1 259
4.29e-101 7 198 6 198

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.44e-16 72 186 50 172
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PSURA_84947T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000280 0.999709 CS pos: 22-23. Pr: 0.8810

TMHMM  Annotations      help

There is no transmembrane helices in PSURA_84947T0-p1.