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CAZyme Information: PSURA_84628T0-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora ramorum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum | |||||||||||
| CAZyme ID | PSURA_84628T0-p1 | |||||||||||
| CAZy Family | GT60 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 32 | 551 | 6.6e-157 | 0.9929577464788732 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 235000 | PRK02106 | 0.0 | 29 | 574 | 2 | 555 | choline dehydrogenase; Validated |
| 225186 | BetA | 2.80e-171 | 26 | 559 | 1 | 542 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| 366272 | GMC_oxred_N | 6.80e-51 | 105 | 329 | 15 | 216 | GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
| 398739 | GMC_oxred_C | 1.35e-39 | 412 | 546 | 3 | 143 | GMC oxidoreductase. This domain found associated with pfam00732. |
| 215420 | PLN02785 | 4.38e-34 | 5 | 551 | 27 | 577 | Protein HOTHEAD |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 2.65e-247 | 1 | 574 | 1 | 581 | |
| 2.42e-200 | 27 | 573 | 19 | 578 | |
| 1.04e-192 | 32 | 573 | 70 | 624 | |
| 3.04e-192 | 16 | 566 | 4 | 566 | |
| 2.67e-165 | 35 | 564 | 35 | 581 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5.19e-94 | 26 | 562 | 1 | 572 | Chain A, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis] |
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| 2.84e-93 | 32 | 562 | 7 | 572 | Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis] |
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| 4.30e-93 | 32 | 562 | 23 | 588 | Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_B Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_C Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_D Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_E Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_F Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis] |
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| 7.87e-93 | 32 | 562 | 7 | 572 | Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis] |
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| 2.18e-92 | 32 | 562 | 7 | 572 | Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.86e-199 | 22 | 573 | 28 | 594 | Choline dehydrogenase, mitochondrial OS=Homo sapiens OX=9606 GN=CHDH PE=1 SV=2 |
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| 5.76e-199 | 19 | 573 | 30 | 599 | Choline dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Chdh PE=1 SV=1 |
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| 1.48e-198 | 19 | 573 | 30 | 596 | Choline dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Chdh PE=1 SV=1 |
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| 1.79e-164 | 29 | 565 | 3 | 550 | Oxygen-dependent choline dehydrogenase OS=Stenotrophomonas maltophilia (strain K279a) OX=522373 GN=betA PE=3 SV=1 |
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| 6.19e-164 | 29 | 564 | 2 | 546 | Oxygen-dependent choline dehydrogenase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) OX=269482 GN=betA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000073 | 0.000008 |