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CAZyme Information: PSURA_84340T0-p1

You are here: Home > Sequence: PSURA_84340T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora ramorum
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum
CAZyme ID PSURA_84340T0-p1
CAZy Family GT48
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
552 PramPr-102_SC0110|CGC1 60408.56 6.8135
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PramorumPr-102 15743 N/A 251 15492
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PSURA_84340T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH5 341 520 1.4e-31 0.6101083032490975

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225344 BglC 1.72e-15 343 481 87 217
Aryl-phospho-beta-D-glucosidase BglC, GH1 family [Carbohydrate transport and metabolism].
128519 APPLE 8.51e-11 193 261 1 73
APPLE domain. Four-fold repeat in plasma kallikrein and coagulation factor XI. Factor XI apple 3 mediates binding to platelets. Factor XI apple 1 binds high-molecular-mass kininogen. Apple 4 in factor XI mediates dimer formation and binds to factor XIIa. Mutations in apple 4 cause factor XI deficiency, an inherited bleeding disorder.
238533 APPLE_Factor_XI_like 1.65e-10 190 261 2 70
Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.
395098 Cellulase 4.67e-08 344 535 39 213
Cellulase (glycosyl hydrolase family 5).
405052 PAN_4 2.31e-07 80 128 1 51
PAN domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.95e-77 263 527 97 361
4.74e-77 270 537 3 279
1.93e-75 33 264 1880 2110
6.01e-72 268 531 9 281
1.52e-70 269 539 13 293

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.56e-10 280 455 4 168
Chain A, Exo-beta-1,3-glucanase [uncultured bacterium],6ZB9_B Chain B, Exo-beta-1,3-glucanase [uncultured bacterium]
1.77e-09 280 455 4 168
Chain A, Exo-beta-1,3-glucanase variant E167Q/E295Q [uncultured bacterium],6ZB8_B Chain B, Exo-beta-1,3-glucanase variant E167Q/E295Q [uncultured bacterium]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.97e-18 280 517 38 270
Glucan 1,3-beta-glucosidase OS=Blumeria graminis OX=34373 PE=3 SV=1
1.81e-17 276 517 26 258
Probable glucan 1,3-beta-glucosidase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=exgA PE=3 SV=2
8.53e-16 242 498 12 258
Probable glucan 1,3-beta-glucosidase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=exgA PE=3 SV=1
1.14e-15 242 498 12 258
Probable glucan 1,3-beta-glucosidase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=exgA PE=3 SV=1
4.81e-15 280 517 43 271
Probable glucan 1,3-beta-glucosidase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=exgA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000268 0.999713 CS pos: 31-32. Pr: 0.9733

TMHMM  Annotations      help

There is no transmembrane helices in PSURA_84340T0-p1.