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CAZyme Information: PSURA_84207T0-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora ramorum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum | |||||||||||
| CAZyme ID | PSURA_84207T0-p1 | |||||||||||
| CAZy Family | GT48 | |||||||||||
| CAZyme Description | Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CBM9 | 38 | 196 | 2e-26 | 0.7747252747252747 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 273362 | 3a01205 | 0.0 | 568 | 1844 | 28 | 1324 | Pleiotropic Drug Resistance (PDR) Family protein. [Transport and binding proteins, Other] |
| 215599 | PLN03140 | 0.0 | 555 | 1884 | 118 | 1470 | ABC transporter G family member; Provisional |
| 273361 | 3a01204 | 9.67e-91 | 1303 | 1878 | 40 | 611 | The Eye Pigment Precursor Transporter (EPP) Family protein. [Transport and binding proteins, Other] |
| 213199 | ABCG_PDR_domain2 | 1.74e-89 | 1279 | 1506 | 1 | 192 | Second domain of the pleiotropic drug resistance-like (PDR) subfamily G of ATP-binding cassette transporters. The pleiotropic drug resistance (PDR) is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins. |
| 273361 | 3a01204 | 2.92e-86 | 615 | 1216 | 37 | 609 | The Eye Pigment Precursor Transporter (EPP) Family protein. [Transport and binding proteins, Other] |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 8.54e-207 | 561 | 1883 | 133 | 1453 | |
| 8.54e-207 | 561 | 1883 | 133 | 1453 | |
| 7.66e-205 | 561 | 1802 | 131 | 1380 | |
| 7.55e-67 | 15 | 366 | 15 | 308 | |
| 8.91e-64 | 15 | 355 | 15 | 297 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.57e-131 | 599 | 1844 | 156 | 1432 | Chain A, Pleiotropic ABC efflux transporter of multiple drugs [Saccharomyces cerevisiae S288C],7P04_A Chain A, Pleiotropic ABC efflux transporter of multiple drugs [Saccharomyces cerevisiae S288C],7P05_A Chain A, Pleiotropic ABC efflux transporter of multiple drugs [Saccharomyces cerevisiae S288C],7P06_A Chain A, Pleiotropic ABC efflux transporter of multiple drugs [Saccharomyces cerevisiae S288C] |
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| 1.59e-49 | 614 | 1204 | 59 | 636 | Structure of inhibitor-bound ABCG2 [Homo sapiens],6ETI_B Structure of inhibitor-bound ABCG2 [Homo sapiens],6FEQ_A Structure of inhibitor-bound ABCG2 [Homo sapiens],6FEQ_B Structure of inhibitor-bound ABCG2 [Homo sapiens],6HIJ_A Cryo-EM structure of the human ABCG2-MZ29-Fab complex with cholesterol and PE lipids docked [Homo sapiens],6HIJ_B Cryo-EM structure of the human ABCG2-MZ29-Fab complex with cholesterol and PE lipids docked [Homo sapiens],6VXF_A Structure of apo-closed ABCG2 [Homo sapiens],6VXF_B Structure of apo-closed ABCG2 [Homo sapiens],6VXH_A Structure of ABCG2 bound to imatinib [Homo sapiens],6VXH_B Structure of ABCG2 bound to imatinib [Homo sapiens],6VXI_A Structure of ABCG2 bound to mitoxantrone [Homo sapiens],6VXI_B Structure of ABCG2 bound to mitoxantrone [Homo sapiens],6VXJ_A Structure of ABCG2 bound to SN38 [Homo sapiens],6VXJ_B Structure of ABCG2 bound to SN38 [Homo sapiens],7NEQ_A Chain A, ATP-binding cassette sub-family G member 2 [Homo sapiens],7NEQ_B Chain B, ATP-binding cassette sub-family G member 2 [Homo sapiens],7NEZ_A Chain A, ATP-binding cassette sub-family G member 2 [Homo sapiens],7NEZ_B Chain B, ATP-binding cassette sub-family G member 2 [Homo sapiens],7NFD_A Chain A, ATP-binding cassette sub-family G member 2 [Homo sapiens],7NFD_B Chain B, ATP-binding cassette sub-family G member 2 [Homo sapiens] |
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| 1.82e-49 | 614 | 1204 | 68 | 645 | Structure of an ABC transporter: complete structure [Homo sapiens],5NJ3_B Structure of an ABC transporter: complete structure [Homo sapiens],5NJG_A Structure of an ABC transporter: part of the structure that could be built de novo [Homo sapiens],5NJG_B Structure of an ABC transporter: part of the structure that could be built de novo [Homo sapiens],6FFC_A Structure of an inhibitor-bound ABC transporter [Homo sapiens],6FFC_B Structure of an inhibitor-bound ABC transporter [Homo sapiens] |
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| 1.84e-49 | 614 | 1204 | 69 | 646 | Chain A, Broad substrate specificity ATP-binding cassette transporter ABCG2 [Homo sapiens],7OJ8_B Chain B, Broad substrate specificity ATP-binding cassette transporter ABCG2 [Homo sapiens],7OJH_A Chain A, Broad substrate specificity ATP-binding cassette transporter ABCG2 [Homo sapiens],7OJH_B Chain B, Broad substrate specificity ATP-binding cassette transporter ABCG2 [Homo sapiens],7OJI_A Chain A, Broad substrate specificity ATP-binding cassette transporter ABCG2 [Homo sapiens],7OJI_B Chain B, Broad substrate specificity ATP-binding cassette transporter ABCG2 [Homo sapiens] |
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| 3.84e-49 | 614 | 1204 | 59 | 636 | Cryo-EM structure of the ABCG2 E211Q mutant bound to ATP and Magnesium [Homo sapiens],6HBU_B Cryo-EM structure of the ABCG2 E211Q mutant bound to ATP and Magnesium [Homo sapiens],6HZM_A Cryo-EM structure of the ABCG2 E211Q mutant bound to ATP and Magnesium (alternative placement of Magnesium into the cryo-EM density) [Homo sapiens],6HZM_B Cryo-EM structure of the ABCG2 E211Q mutant bound to ATP and Magnesium (alternative placement of Magnesium into the cryo-EM density) [Homo sapiens] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.74e-224 | 555 | 1884 | 114 | 1434 | Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum OX=4097 GN=PDR1 PE=2 SV=1 |
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| 1.98e-222 | 555 | 1884 | 118 | 1436 | Pleiotropic drug resistance protein 1 OS=Nicotiana plumbaginifolia OX=4092 GN=PDR1 PE=1 SV=1 |
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| 2.34e-218 | 553 | 1884 | 111 | 1426 | ABC transporter G family member 31 OS=Arabidopsis thaliana OX=3702 GN=ABCG31 PE=1 SV=1 |
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| 1.02e-216 | 555 | 1884 | 117 | 1457 | ABC transporter G family member 36 OS=Oryza sativa subsp. japonica OX=39947 GN=ABCG36 PE=2 SV=1 |
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| 1.37e-216 | 556 | 1806 | 150 | 1442 | ABC transporter G family member 38 OS=Oryza sativa subsp. japonica OX=39947 GN=ABCG38 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000086 | 0.000000 |
TMHMM Annotations download full data without filtering help
| Start | End |
|---|---|
| 995 | 1017 |
| 1038 | 1060 |
| 1075 | 1097 |
| 1102 | 1124 |
| 1194 | 1216 |
| 1617 | 1639 |
| 1654 | 1676 |
| 1697 | 1719 |
| 1732 | 1754 |
| 1761 | 1783 |
| 1854 | 1876 |