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CAZyme Information: PSURA_84190T0-p1

You are here: Home > Sequence: PSURA_84190T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora ramorum
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum
CAZyme ID PSURA_84190T0-p1
CAZy Family GT48
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
206 PramPr-102_SC0106|CGC1 22842.12 4.2567
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PramorumPr-102 15743 N/A 251 15492
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PSURA_84190T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 4 199 1.1e-58 0.8040816326530612

CDD Domains      help

PSURA_84190T0-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.70e-124 1 186 18 203
1.35e-123 1 186 1 182
1.85e-123 1 186 18 203
1.92e-123 1 186 18 203
2.02e-122 1 188 18 202

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.76e-29 18 173 24 174
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PSURA_84190T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.705820 0.294185

TMHMM  Annotations      help

There is no transmembrane helices in PSURA_84190T0-p1.