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CAZyme Information: PSURA_84167T0-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora ramorum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum | |||||||||||
| CAZyme ID | PSURA_84167T0-p1 | |||||||||||
| CAZy Family | PL4 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 215599 | PLN03140 | 0.0 | 70 | 1349 | 110 | 1467 | ABC transporter G family member; Provisional |
| 273362 | 3a01205 | 0.0 | 69 | 1315 | 5 | 1324 | Pleiotropic Drug Resistance (PDR) Family protein. [Transport and binding proteins, Other] |
| 213199 | ABCG_PDR_domain2 | 1.21e-89 | 762 | 987 | 1 | 192 | Second domain of the pleiotropic drug resistance-like (PDR) subfamily G of ATP-binding cassette transporters. The pleiotropic drug resistance (PDR) is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins. |
| 273361 | 3a01204 | 9.62e-89 | 781 | 1346 | 37 | 608 | The Eye Pigment Precursor Transporter (EPP) Family protein. [Transport and binding proteins, Other] |
| 273361 | 3a01204 | 2.26e-79 | 131 | 705 | 37 | 601 | The Eye Pigment Precursor Transporter (EPP) Family protein. [Transport and binding proteins, Other] |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 4.42e-189 | 70 | 1322 | 118 | 1422 | |
| 7.19e-188 | 70 | 1323 | 120 | 1422 | |
| 7.19e-188 | 70 | 1323 | 120 | 1422 | |
| 6.41e-133 | 1380 | 1642 | 404 | 669 | |
| 1.03e-110 | 1380 | 1642 | 426 | 686 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.16e-112 | 131 | 1315 | 172 | 1432 | Chain A, Pleiotropic ABC efflux transporter of multiple drugs [Saccharomyces cerevisiae S288C],7P04_A Chain A, Pleiotropic ABC efflux transporter of multiple drugs [Saccharomyces cerevisiae S288C],7P05_A Chain A, Pleiotropic ABC efflux transporter of multiple drugs [Saccharomyces cerevisiae S288C],7P06_A Chain A, Pleiotropic ABC efflux transporter of multiple drugs [Saccharomyces cerevisiae S288C] |
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| 1.31e-52 | 764 | 1286 | 76 | 598 | Chain A, Isoform 4 of ATP-binding cassette sub-family G member 1 [Homo sapiens],7R8C_B Chain B, Isoform 4 of ATP-binding cassette sub-family G member 1 [Homo sapiens] |
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| 3.18e-52 | 764 | 1286 | 76 | 598 | Chain A, Isoform 4 of ATP-binding cassette sub-family G member 1 [Homo sapiens],7R8D_B Chain B, Isoform 4 of ATP-binding cassette sub-family G member 1 [Homo sapiens],7R8E_A Chain A, Isoform 4 of ATP-binding cassette sub-family G member 1 [Homo sapiens],7R8E_B Chain B, Isoform 4 of ATP-binding cassette sub-family G member 1 [Homo sapiens] |
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| 3.93e-52 | 764 | 1286 | 76 | 598 | Chain A, Isoform 4 of ATP-binding cassette sub-family G member 1 [Homo sapiens],7OZ1_B Chain B, Isoform 4 of ATP-binding cassette sub-family G member 1 [Homo sapiens] |
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| 6.49e-52 | 751 | 1285 | 13 | 581 | Structure of inhibitor-bound ABCG2 [Homo sapiens],6ETI_B Structure of inhibitor-bound ABCG2 [Homo sapiens],6FEQ_A Structure of inhibitor-bound ABCG2 [Homo sapiens],6FEQ_B Structure of inhibitor-bound ABCG2 [Homo sapiens],6HIJ_A Cryo-EM structure of the human ABCG2-MZ29-Fab complex with cholesterol and PE lipids docked [Homo sapiens],6HIJ_B Cryo-EM structure of the human ABCG2-MZ29-Fab complex with cholesterol and PE lipids docked [Homo sapiens],6VXF_A Structure of apo-closed ABCG2 [Homo sapiens],6VXF_B Structure of apo-closed ABCG2 [Homo sapiens],6VXH_A Structure of ABCG2 bound to imatinib [Homo sapiens],6VXH_B Structure of ABCG2 bound to imatinib [Homo sapiens],6VXI_A Structure of ABCG2 bound to mitoxantrone [Homo sapiens],6VXI_B Structure of ABCG2 bound to mitoxantrone [Homo sapiens],6VXJ_A Structure of ABCG2 bound to SN38 [Homo sapiens],6VXJ_B Structure of ABCG2 bound to SN38 [Homo sapiens],7NEQ_A Chain A, ATP-binding cassette sub-family G member 2 [Homo sapiens],7NEQ_B Chain B, ATP-binding cassette sub-family G member 2 [Homo sapiens],7NEZ_A Chain A, ATP-binding cassette sub-family G member 2 [Homo sapiens],7NEZ_B Chain B, ATP-binding cassette sub-family G member 2 [Homo sapiens],7NFD_A Chain A, ATP-binding cassette sub-family G member 2 [Homo sapiens],7NFD_B Chain B, ATP-binding cassette sub-family G member 2 [Homo sapiens] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.74e-226 | 70 | 1350 | 103 | 1441 | ABC transporter G family member 37 OS=Oryza sativa subsp. japonica OX=39947 GN=ABCG37 PE=2 SV=1 |
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| 2.44e-221 | 46 | 1351 | 89 | 1437 | ABC transporter G family member 32 OS=Oryza sativa subsp. japonica OX=39947 GN=ABCG32 PE=2 SV=1 |
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| 2.99e-218 | 70 | 1344 | 103 | 1429 | Pleiotropic drug resistance protein TUR2 OS=Spirodela polyrhiza OX=29656 GN=TUR2 PE=1 SV=1 |
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| 3.65e-217 | 70 | 1320 | 106 | 1403 | Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum OX=4097 GN=PDR1 PE=2 SV=1 |
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| 1.28e-215 | 70 | 1360 | 92 | 1415 | ABC transporter G family member 29 OS=Arabidopsis thaliana OX=3702 GN=ABCG29 PE=2 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000049 | 0.000000 |
TMHMM Annotations download full data without filtering help
| Start | End |
|---|---|
| 477 | 499 |
| 556 | 578 |
| 585 | 604 |
| 614 | 636 |
| 643 | 662 |
| 691 | 713 |
| 1099 | 1121 |
| 1131 | 1153 |
| 1174 | 1196 |
| 1211 | 1233 |
| 1240 | 1261 |
| 1271 | 1293 |
| 1326 | 1348 |
| 1604 | 1626 |