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CAZyme Information: PSURA_83574T0-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora ramorum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum | |||||||||||
| CAZyme ID | PSURA_83574T0-p1 | |||||||||||
| CAZy Family | GT20 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:10 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 44 | 349 | 7.1e-63 | 0.963076923076923 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 1.08e-63 | 48 | 349 | 1 | 321 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 227721 | Pgu1 | 1.22e-18 | 99 | 317 | 200 | 435 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| 178580 | PLN03003 | 8.98e-15 | 48 | 293 | 51 | 302 | Probable polygalacturonase At3g15720 |
| 215540 | PLN03010 | 4.74e-14 | 86 | 298 | 122 | 326 | polygalacturonase |
| 215120 | PLN02188 | 3.84e-12 | 37 | 310 | 77 | 348 | polygalacturonase/glycoside hydrolase family protein |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 7.66e-213 | 1 | 349 | 1 | 363 | |
| 3.15e-205 | 1 | 349 | 1 | 363 | |
| 1.28e-201 | 1 | 349 | 1 | 360 | |
| 3.64e-185 | 1 | 349 | 1 | 361 | |
| 1.62e-178 | 16 | 349 | 13 | 358 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.79e-77 | 32 | 349 | 10 | 344 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 1.79e-77 | 32 | 349 | 10 | 344 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 4.47e-76 | 32 | 349 | 2 | 336 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 1.58e-70 | 31 | 349 | 1 | 336 | Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger] |
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| 2.15e-68 | 33 | 349 | 4 | 339 | Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.62e-76 | 1 | 349 | 1 | 364 | Endopolygalacturonase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgaB PE=1 SV=2 |
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| 5.73e-75 | 31 | 349 | 32 | 367 | Probable endopolygalacturonase I OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pgaI PE=3 SV=1 |
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| 5.73e-75 | 31 | 349 | 32 | 367 | Endopolygalacturonase B OS=Aspergillus flavus (strain ATCC MYA-384 / AF70) OX=1392242 GN=pgaB PE=2 SV=2 |
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| 5.73e-75 | 31 | 349 | 32 | 367 | Endopolygalacturonase I OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pgaI PE=1 SV=1 |
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| 9.08e-75 | 30 | 349 | 35 | 371 | Polygalacturonase OS=Penicillium janthinellum OX=5079 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000231 | 0.999745 | CS pos: 25-26. Pr: 0.7978 |