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CAZyme Information: PSURA_83548T0-p1

You are here: Home > Sequence: PSURA_83548T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora ramorum
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum
CAZyme ID PSURA_83548T0-p1
CAZy Family GT2
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
608 PramPr-102_SC0090|CGC2 68144.53 6.7766
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PramorumPr-102 15743 N/A 251 15492
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.1.122:14

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT31 237 446 3e-33 0.9791666666666666

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
250845 Galactosyl_T 2.28e-21 237 446 3 194
Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2.
215596 PLN03133 3.99e-13 220 489 385 634
beta-1,3-galactosyltransferase; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.05e-13 220 487 386 633
3.38e-13 219 445 87 299
3.46e-13 214 435 81 288
4.85e-13 220 484 401 644
7.76e-13 220 478 351 578

PDB Hits      help

PSURA_83548T0-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.14e-14 214 435 81 288
Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase B OS=Danio rerio OX=7955 GN=b3gnt5b PE=2 SV=1
1.95e-13 220 487 392 639
Beta-1,3-galactosyltransferase GALT1 OS=Arabidopsis thaliana OX=3702 GN=GALT1 PE=1 SV=1
4.35e-13 222 487 373 617
Hydroxyproline O-galactosyltransferase GALT3 OS=Arabidopsis thaliana OX=3702 GN=GALT3 PE=2 SV=1
5.97e-13 214 433 80 285
Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase OS=Sus scrofa OX=9823 GN=B3GNT5 PE=2 SV=1
7.96e-13 214 471 81 328
Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase OS=Xenopus tropicalis OX=8364 GN=b3gnt5 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.499322 0.500676 CS pos: 22-23. Pr: 0.4620

TMHMM  Annotations      download full data without filtering help

Start End
9 31