logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: PSURA_83496T0-p1

You are here: Home > Sequence: PSURA_83496T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora ramorum
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum
CAZyme ID PSURA_83496T0-p1
CAZy Family GT1|GT1
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
462 52427.36 5.8925
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PramorumPr-102 15743 N/A 251 15492
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PSURA_83496T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT71 83 345 2.2e-40 0.9583333333333334

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
402574 Mannosyl_trans3 2.30e-19 94 350 15 272
Mannosyltransferase putative. This family is conserved in fungi. Several members are annotated as being alpha-1,3-mannosyltransferase but this could not be confirmed.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.00e-118 76 441 127 499
5.26e-112 69 458 47 431
1.66e-102 78 379 63 374
5.08e-68 74 443 85 454
3.50e-61 75 439 59 447

PDB Hits      help

PSURA_83496T0-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.85e-10 74 322 190 443
Probable alpha-1,3-mannosyltransferase MNT4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MNT4 PE=3 SV=1
4.43e-06 81 337 175 427
Alpha-1,3-mannosyltransferase MNT2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MNT2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000004 0.000010

TMHMM  Annotations      download full data without filtering help

Start End
38 60