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CAZyme Information: PSURA_82838T0-p1

You are here: Home > Sequence: PSURA_82838T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora ramorum
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum
CAZyme ID PSURA_82838T0-p1
CAZy Family GH81
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
695 74259.62 4.1528
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PramorumPr-102 15743 N/A 251 15492
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.174:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH78 63 636 6.8e-72 0.9841269841269841

CDD Domains      help

PSURA_82838T0-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
7.82e-141 32 687 58 685
7.82e-141 32 687 58 685
1.49e-140 1 638 1 632
1.49e-140 1 638 1 632
2.17e-140 32 687 58 685

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.32e-08 66 591 194 657
Crystal structure of a putative alpha-rhamnosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      help

PSURA_82838T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000389 0.999587 CS pos: 22-23. Pr: 0.9706

TMHMM  Annotations      help

There is no transmembrane helices in PSURA_82838T0-p1.