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CAZyme Information: PSURA_81929T0-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora ramorum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum | |||||||||||
| CAZyme ID | PSURA_81929T0-p1 | |||||||||||
| CAZy Family | GH72 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.1.1.11:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE8 | 38 | 320 | 2e-70 | 0.9409722222222222 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 178051 | PLN02432 | 6.52e-46 | 37 | 319 | 10 | 272 | putative pectinesterase |
| 178113 | PLN02497 | 5.17e-40 | 35 | 340 | 31 | 327 | probable pectinesterase |
| 178372 | PLN02773 | 6.27e-39 | 33 | 319 | 2 | 282 | pectinesterase |
| 395871 | Pectinesterase | 1.52e-38 | 38 | 317 | 2 | 276 | Pectinesterase. |
| 215117 | PLN02176 | 4.26e-37 | 19 | 315 | 23 | 309 | putative pectinesterase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 2.58e-214 | 7 | 344 | 6 | 343 | |
| 7.83e-163 | 1 | 344 | 1 | 344 | |
| 2.24e-162 | 1 | 344 | 1 | 344 | |
| 7.08e-162 | 1 | 344 | 1 | 338 | |
| 2.59e-157 | 1 | 344 | 1 | 348 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 8.45e-59 | 30 | 343 | 3 | 299 | Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015] |
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| 1.19e-58 | 30 | 343 | 3 | 299 | Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015] |
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| 5.53e-32 | 23 | 317 | 3 | 283 | Pectin methylesterase from Carrot [Daucus carota] |
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| 1.43e-29 | 35 | 317 | 3 | 279 | Chain A, Pectinesterase 1 [Solanum lycopersicum] |
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| 2.42e-12 | 48 | 307 | 46 | 366 | The structure of rice weevil pectin methyl esterase [Sitophilus oryzae] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.87e-77 | 30 | 344 | 20 | 330 | Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1 |
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| 4.21e-76 | 30 | 343 | 20 | 330 | Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1 |
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| 5.39e-66 | 30 | 343 | 28 | 324 | Probable pectinesterase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pmeA PE=3 SV=1 |
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| 4.26e-65 | 30 | 343 | 28 | 324 | Probable pectinesterase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pmeA PE=3 SV=1 |
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| 1.20e-64 | 30 | 343 | 28 | 324 | Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000191 | 0.999770 | CS pos: 20-21. Pr: 0.9732 |