You are browsing environment: FUNGIDB
CAZyme Information: PSURA_81321T0-p1
You are here: Home > Sequence: PSURA_81321T0-p1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora ramorum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum | |||||||||||
| CAZyme ID | PSURA_81321T0-p1 | |||||||||||
| CAZy Family | GH5 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.37:92 | 3.2.1.55:39 | 3.2.1.21:1 | 3.2.1.6:1 | 3.2.1.73:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH3 | 82 | 330 | 6.6e-68 | 0.9722222222222222 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 178629 | PLN03080 | 0.0 | 11 | 765 | 6 | 779 | Probable beta-xylosidase; Provisional |
| 185053 | PRK15098 | 2.62e-97 | 115 | 761 | 118 | 757 | beta-glucosidase BglX. |
| 396478 | Glyco_hydro_3_C | 7.01e-58 | 401 | 634 | 1 | 216 | Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. |
| 224389 | BglX | 1.31e-57 | 114 | 432 | 80 | 365 | Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism]. |
| 395747 | Glyco_hydro_3 | 4.20e-34 | 111 | 348 | 82 | 302 | Glycosyl hydrolase family 3 N terminal domain. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.09e-210 | 37 | 765 | 33 | 767 | |
| 2.18e-210 | 16 | 765 | 11 | 775 | |
| 3.38e-209 | 37 | 765 | 32 | 766 | |
| 3.49e-209 | 37 | 763 | 31 | 773 | |
| 6.76e-209 | 1 | 764 | 1 | 773 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.97e-160 | 37 | 758 | 5 | 721 | Chain A, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium] |
|
| 2.97e-160 | 37 | 758 | 5 | 721 | Chain A, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium] |
|
| 2.25e-145 | 24 | 756 | 21 | 743 | Chain A, BETA-XYLOSIDASE [Trichoderma reesei],5A7M_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei] |
|
| 2.32e-145 | 24 | 756 | 21 | 743 | Chain A, BETA-XYLOSIDASE [Trichoderma reesei],5AE6_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei] |
|
| 9.89e-142 | 23 | 752 | 18 | 737 | GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7I_B GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7J_A Chain A, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4],6Q7J_B Chain B, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5.53e-206 | 16 | 754 | 5 | 756 | Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BXL7 PE=2 SV=2 |
|
| 1.74e-200 | 32 | 764 | 44 | 783 | Beta-D-xylosidase 4 OS=Arabidopsis thaliana OX=3702 GN=BXL4 PE=1 SV=1 |
|
| 2.53e-200 | 37 | 764 | 37 | 771 | Beta-D-xylosidase 1 OS=Arabidopsis thaliana OX=3702 GN=BXL1 PE=1 SV=1 |
|
| 1.10e-198 | 17 | 763 | 16 | 771 | Beta-D-xylosidase 3 OS=Arabidopsis thaliana OX=3702 GN=BXL3 PE=1 SV=1 |
|
| 1.06e-197 | 9 | 765 | 5 | 760 | Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000515 | 0.999450 | CS pos: 26-27. Pr: 0.9712 |