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CAZyme Information: PSURA_81106T0-p1

You are here: Home > Sequence: PSURA_81106T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora ramorum
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum
CAZyme ID PSURA_81106T0-p1
CAZy Family GH5
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
202 22180.81 5.5447
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PramorumPr-102 15743 N/A 251 15492
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PSURA_81106T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 19 191 1.8e-48 0.6979591836734694

CDD Domains      help

PSURA_81106T0-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.68e-115 1 201 1 203
9.43e-115 1 202 1 204
3.81e-109 1 202 1 202
1.13e-108 1 201 1 200
2.20e-108 1 202 1 202

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.54e-24 28 187 1 171
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PSURA_81106T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.007787 0.992181 CS pos: 27-28. Pr: 0.8113

TMHMM  Annotations      help

There is no transmembrane helices in PSURA_81106T0-p1.