CAZyme Information: PSURA_80632T0-p1

Basic Information

• Species: Phytophthora ramorum
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum
• CAZyme ID: PSURA_80632T0-p1
• CAZy Family: GH5
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
330	PramPr-102_SC0051|CGC3	34091.66	3.7731

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PramorumPr-102	15743	N/A	251	15492

• Gene Location: location=PramPr-102_SC0051:39676-40668(-)

Full Sequence      

MNVLVLIASGTIVLSSVPLVLGHGYIVDPAATWKDGYAVNGWGSSIDSSMWGSIDSSVYG
YGTTATVAFFEAQFNSSGYNSLGQFIETNQVLYSDNIDEQCGYTVYDDTARQTMPATNLT
HTGFTHPGPCEVWCDDTVVLFEYDCQATYPDIPAGIPYDESLCADANRFTIYWLAVHGAP
WQVYTDCVWLDGGSGSGSAPSSVAETVSSSVATAPPTTSSESTATATTAYPDTSSSSTSS
TTSTTTTAPSTTTATSTASSAASSASTTTSSSSTANEADEASTPTTTSASTSTSSSDTST
VITTTAPATESSEASGASTTAKCSRRMRRD

Enzyme Prediction     

No EC number prediction in PSURA_80632T0-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
AA17	12	264	1.4e-65	0.9591836734693877

CDD Domains     

PSURA_80632T0-p1 has no CDD domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ETI31519.1|AA17	3.97e-93	1	195	1	195
ETL25332.1|AA17	5.62e-93	1	195	1	195
ETL78558.1|AA17	1.01e-92	1	195	19	213
ETK71904.1|AA17	1.60e-92	1	195	1	195
ETM31823.1|AA17	2.02e-92	1	195	19	213

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6Z5Y_A	3.85e-18	23	194	1	174	Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits     

PSURA_80632T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.033341	0.966622	CS pos: 22-23. Pr: 0.9458

TMHMM  Annotations     

Start	End
5	27