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CAZyme Information: PSURA_80631T0-p1

You are here: Home > Sequence: PSURA_80631T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora ramorum
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum
CAZyme ID PSURA_80631T0-p1
CAZy Family GH5
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
320 PramPr-102_SC0051|CGC4 32838.77 4.2032
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PramorumPr-102 15743 N/A 251 15492
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PSURA_80631T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 11 251 1.3e-68 0.9428571428571428

CDD Domains      help

PSURA_80631T0-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.55e-134 1 195 1 195
2.21e-134 1 195 1 195
4.13e-134 1 195 19 213
6.30e-134 1 195 1 195
8.31e-134 1 195 19 213

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.26e-16 23 194 1 174
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PSURA_80631T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000329 0.999647 CS pos: 22-23. Pr: 0.9441

TMHMM  Annotations      help

There is no transmembrane helices in PSURA_80631T0-p1.