CAZyme Information: PSURA_79140T0-p1

Basic Information

• Species: Phytophthora ramorum
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum
• CAZyme ID: PSURA_79140T0-p1
• CAZy Family: GH43
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
424		44524.54	3.7599

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PramorumPr-102	15743	N/A	251	15492

• Gene Location: location=PramPr-102_SC0037:285053-286398(+)

Full Sequence      

MLSGLALSAAVALVVLTSPANAHGYLEEPKPSWTSGSANPGWITMVDNYWDIGSGGDQCG
LYKTMAAEKKMTVRDVVLDIVKGQKCGNTDDSASPQPIPSDGKAKWLGNGGGGFTHVGPC
EIYLDDTMVLHSDNCQDDYPGGDVGSTQTSDMPVDYSSCNGKCTLTIYWLAFQNAQWQAY
VNCVPLSGSGSATQTQSTAGSSTSAQETPATQGSSSEQGEADSSATEAPSSEQQSTQAPS
SEQQSTETPSTQAPATQASSEQQSAEAPSAEQQETQAPSTEQQSTQAPSTQAPSSEQQST
QAPSPEQQPTQAPSAEQQDTQAPSTQTPSSEQQSTQAPSPEQQPTQAPSPEQQATQAPST
EQQPTQAPSNQWTPTPWTQAPSSQWTQAPSTQWTQAPSTEQQSMTFNTLNGETGTVQPSS
NLRK

Enzyme Prediction     

No EC number prediction in PSURA_79140T0-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
AA17	10	252	8.3e-68	0.9877551020408163

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
236090	PRK07764	1.54e-12	242	369	382	501	DNA polymerase III subunits gamma and tau; Validated
236090	PRK07764	1.99e-12	174	376	579	780	DNA polymerase III subunits gamma and tau; Validated
236090	PRK07764	2.04e-11	219	352	388	514	DNA polymerase III subunits gamma and tau; Validated
165527	PHA03269	2.38e-11	269	404	18	157	envelope glycoprotein C; Provisional
223021	PHA03247	1.66e-09	192	398	2744	2961	large tegument protein UL36; Provisional

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ETM32479.1|AA17	1.18e-101	6	198	5	197
ETP30231.1|AA17	4.21e-101	6	198	5	197
ETO60944.1|AA17	4.21e-101	6	198	5	197
ETI54320.1|AA17	8.01e-101	1	198	1	198
ETK72575.1|AA17	8.09e-101	6	198	5	197

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6Z5Y_A	8.57e-32	23	188	1	172	Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits     

PSURA_79140T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000225	0.999740	CS pos: 22-23. Pr: 0.9788

TMHMM  Annotations     

There is no transmembrane helices in PSURA_79140T0-p1.