CAZyme Information: PSURA_78229T0-p1

Basic Information

• Species: Phytophthora ramorum
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum
• CAZyme ID: PSURA_78229T0-p1
• CAZy Family: GH30
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
791		85595.87	4.0512

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PramorumPr-102	15743	N/A	251	15492

• Gene Location: location=PramPr-102_SC0030:131875-134250(-)

Full Sequence      

MLTKWLLLTAAVLQSALASSSGSSDALDSQAQTIVDGFSTDQVIGQMCQLDISMVLNDDN
SVNETLVRQYAQLGVGSYLNSPFAGWNATGWRDTIEDIQTFHMDENGGHPMVYGLDSVHG
AQYVDQAVMFPQQINAGASFNPELVRKMGYVTGRDTAAAGISWVLGPILDISYNPLWTRT
YETFGEDPYLASVLGAAYIQGVQNNSQSGACMKHFIGYSQTVTGVDREGVTISDYDLLNY
HVPSFKAGIEHGAMSTMENYISVNGVPVVSSTKILNNLLRNDLDFDGVVVTDWGEVNNLQ
SWHRVVSTQQAAVELVIANTSLDMTMVPYSTDFIDQAKYVLSNNSDYEARLRASAKRIVK
MKLDMGLYDTPVPGADNVALVGNDDDLAEALDLARESIVLLKNDDNILPLTNSTSVFLTG
FSVDDIGYQCGGWSIYWQGTSGNDYFAHGMSVKEGIENLVGSDSVTYFNGLSDDGTYSDE
DLSTAVGMASDADVIIAAIGEAPYAEKWGDIDELVLPSGQLEYVQALADTGKKVILILFE
GRPRLLGSLPDSVNAVIWGGLPCEQGGQAMAEILYGEVNPSGRLPITYPRYSGHIMIPYR
HRVSTQCSSGDCEMQWDFGAGLSYTNFSYSDLKLSTDKITSQSATISVSVTVTNNGTMAG
KETVMLFMIQPYRAISVPEVKMLRKFEKIELEAGASATVMVTLTADDWSVYNPQIGSGFN
QVAENGEFVVAIHPDTDCDVYNDNGITNELCANFTLAVTSTTVGDSTSASAPLTQIAWWA
TITSVVVGLLL

Enzyme Prediction     

EC	3.2.1.21:1

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	106	316	3.8e-63	0.9305555555555556

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
185053	PRK15098	6.68e-105	110	736	105	754	beta-glucosidase BglX.
224389	BglX	1.55e-64	39	458	2	393	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
178629	PLN03080	3.89e-54	124	714	108	754	Probable beta-xylosidase; Provisional
395747	Glyco_hydro_3	1.12e-49	39	358	1	313	Glycosyl hydrolase family 3 N terminal domain.
396478	Glyco_hydro_3_C	3.01e-46	398	624	1	216	Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UIZ29009.1|GH3	6.77e-309	1	756	1	762
UIZ29613.1|GH3	1.02e-280	1	756	46	819
CCA27737.1|GH3	1.22e-280	29	756	66	808
UIZ27116.1|GH3	7.17e-276	47	756	1	724
UIZ29432.1|GH3	2.66e-269	1	756	1	763

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5JP0_A	1.88e-129	26	707	12	718	Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus],5JP0_B Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus]
5TF0_A	1.60e-75	41	732	23	736	Crystal Structure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393],5TF0_B Crystal Structure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393]
4ZOA_A	5.58e-75	108	741	83	715	Crystal Structure of beta-glucosidase from Listeria innocua in complex with isofagomine [Listeria innocua Clip11262],4ZOA_B Crystal Structure of beta-glucosidase from Listeria innocua in complex with isofagomine [Listeria innocua Clip11262],4ZOB_A Crystal Structure of beta-glucosidase from Listeria innocua in complex with gluconolactone [Listeria innocua Clip11262],4ZOB_B Crystal Structure of beta-glucosidase from Listeria innocua in complex with gluconolactone [Listeria innocua Clip11262],4ZOD_A Crystal Structure of beta-glucosidase from Listeria innocua in complex with glucose [Listeria innocua Clip11262],4ZOD_B Crystal Structure of beta-glucosidase from Listeria innocua in complex with glucose [Listeria innocua Clip11262],4ZOE_A Crystal Structure of beta-glucosidase from Listeria innocua [Listeria innocua Clip11262],4ZOE_B Crystal Structure of beta-glucosidase from Listeria innocua [Listeria innocua Clip11262]
5M6G_A	9.72e-75	91	590	104	589	Crystal structure Glucan 1,4-beta-glucosidase from Saccharopolyspora erythraea [Saccharopolyspora erythraea D]
5Z9S_A	4.64e-74	41	732	38	771	Functional and Structural Characterization of a beta-Glucosidase Involved in Saponin Metabolism from Intestinal Bacteria [Bifidobacterium longum],5Z9S_B Functional and Structural Characterization of a beta-Glucosidase Involved in Saponin Metabolism from Intestinal Bacteria [Bifidobacterium longum]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q23892|GLUA_DICDI	1.41e-144	26	732	75	811	Lysosomal beta glucosidase OS=Dictyostelium discoideum OX=44689 GN=gluA PE=1 SV=2
sp|A7LXU3|BGH3B_BACO1	1.40e-128	26	707	34	740	Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1
sp|T2KMH0|PLH24_FORAG	2.73e-78	111	739	68	713	Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
sp|P33363|BGLX_ECOLI	1.06e-74	110	736	105	754	Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
sp|Q56078|BGLX_SALTY	2.68e-73	110	736	105	754	Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000222	0.999755	CS pos: 18-19. Pr: 0.9824

TMHMM  Annotations     

There is no transmembrane helices in PSURA_78229T0-p1.