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CAZyme Information: PSURA_78177T0-p1

You are here: Home > Sequence: PSURA_78177T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora ramorum
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora ramorum
CAZyme ID PSURA_78177T0-p1
CAZy Family GH30
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
324 PramPr-102_SC0029|CGC3 32930.39 3.9345
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PramorumPr-102 15743 N/A 251 15492
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PSURA_78177T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 13 266 5.2e-74 0.9061224489795918

CDD Domains      help

PSURA_78177T0-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.49e-129 1 213 1 213
5.33e-128 1 213 1 213
8.73e-127 1 213 1 213
4.84e-126 1 213 1 213
1.53e-119 13 213 11 211

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.35e-11 101 196 70 170
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PSURA_78177T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000310 0.999640 CS pos: 23-24. Pr: 0.9779

TMHMM  Annotations      help

There is no transmembrane helices in PSURA_78177T0-p1.